Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 6:41061940-41122228

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32 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
5830405F06Rik 6 41055883 to 41063102 7219 + lincRNA gene RIKEN cDNA 5830405F06 gene
Tssr55805 6 41062291 to 41062302 11 + TSS region transcription start site region 55805
Tssr55806 6 41062321 to 41062338 17 + TSS region transcription start site region 55806
Tssr55807 6 41062342 to 41062356 14 + TSS region transcription start site region 55807
Trbv5 6 41062359 to 41062803 444 + gene segment T cell receptor beta, variable 5
Trbv6 6 41066879 to 41067154 275 + pseudogenic gene segment T cell receptor beta variable 6
Trbv7 6 41080253 to 41080654 401 + pseudogenic gene segment T cell receptor beta variable 7
Gm49885 6 41081587 to 41091983 10396 + sense overlapping lncRNA gene predicted gene, 49885
Trbv8 6 41084821 to 41085105 284 + pseudogenic gene segment T cell receptor beta variable 8
Trbv9 6 41087999 to 41088288 289 + pseudogenic gene segment T cell receptor beta variable 9
Trbv10 6 41091940 to 41092228 288 + pseudogenic gene segment T cell receptor beta variable 10
Trbv11 6 41107044 to 41107303 259 + pseudogenic gene segment T cell receptor beta variable 11
Tssr55808 6 41113368 to 41113379 11 + TSS region transcription start site region 55808
Tssr55809 6 41113516 to 41113547 31 + TSS region transcription start site region 55809
Tssr55810 6 41113552 to 41113581 29 + TSS region transcription start site region 55810
Trbv12-1 6 41113567 to 41114067 500 + gene segment T cell receptor beta, variable 12-1
Tssr55811 6 41113582 to 41113593 11 + TSS region transcription start site region 55811
Tssr55812 6 41115998 to 41115999 1 + TSS region transcription start site region 55812
Tssr55813 6 41116000 to 41116025 25 + TSS region transcription start site region 55813
Trbv13-1 6 41116036 to 41116468 432 + gene segment T cell receptor beta, variable 13-1
Tssr55814 6 41116037 to 41116055 18 + TSS region transcription start site region 55814
Tssr55815 6 41118449 to 41118460 11 + TSS region transcription start site region 55815
Tssr55816 6 41118495 to 41118506 11 + TSS region transcription start site region 55816
Tssr55817 6 41118818 to 41118851 33 + TSS region transcription start site region 55817
Trbv12-2 6 41118864 to 41119364 500 + gene segment T cell receptor beta, variable 12-2
Tssr55818 6 41121323 to 41121334 11 + TSS region transcription start site region 55818
Tssr55819 6 41121339 to 41121382 43 + TSS region transcription start site region 55819
Trbv13-2 6 41121396 to 41121832 436 + gene segment T cell receptor beta, variable 13-2
Tssr55820 6 41121549 to 41121566 17 + TSS region transcription start site region 55820
Tssr60553 6 41121833 to 41121849 16 - TSS region transcription start site region 60553
Tssr55821 6 41122004 to 41122013 9 + TSS region transcription start site region 55821
Tssr55822 6 41122030 to 41122042 12 + TSS region transcription start site region 55822