Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 6:40844712-41014716

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29 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Mgam2-ps 6 40797824 to 40855590 57766 + pseudogene maltase-glucoamylase 2, pseudogene
Moxd2 6 40878794 to 40887494 8700 - protein coding gene monooxygenase, DBH-like 2
Gm38276 6 40889528 to 40890870 1342 - unclassified gene predicted gene, 38276
Tssr55769 6 40891196 to 40891207 11 + TSS region transcription start site region 55769
Tssr55770 6 40891221 to 40891242 21 + TSS region transcription start site region 55770
Trbv1 6 40891296 to 40891885 589 + gene segment T cell receptor beta, variable 1
Trbv4c2 6 40891296 to 71379171 30487875 QTL T cell receptor beta variable 4, control 2
Tcrb 6 40891296 to 41558371 667075 + complex/cluster/region T cell receptor beta chain
Tssr55771 6 40891350 to 40891359 9 + TSS region transcription start site region 55771
Tssr55772 6 40891403 to 40891427 24 + TSS region transcription start site region 55772
Tssr55773 6 40891431 to 40891451 20 + TSS region transcription start site region 55773
Tssr55774 6 40891676 to 40891692 16 + TSS region transcription start site region 55774
Prss58 6 40895270 to 40900387 5117 - protein coding gene protease, serine 58
Tssr60525 6 40900368 to 40900394 26 - TSS region transcription start site region 60525
1700074P13Rik 6 40920437 to 40940557 20120 - protein coding gene RIKEN cDNA 1700074P13 gene
Tssr60526 6 40929712 to 40929716 4 - TSS region transcription start site region 60526
Tssr60527 6 40929731 to 40929745 14 - TSS region transcription start site region 60527
Tssr60528 6 40940527 to 40940554 27 - TSS region transcription start site region 60528
Tssr60529 6 40940932 to 40940946 14 - TSS region transcription start site region 60529
Tssr60530 6 40940970 to 40940977 7 - TSS region transcription start site region 60530
Gm4744 6 40948375 to 40951870 3495 - protein coding gene predicted gene 4744
Gm29588 6 40950224 to 40950521 297 + antisense lncRNA gene predicted gene 29588
Tssr60531 6 40954377 to 40954385 8 - TSS region transcription start site region 60531
Tssr55775 6 40964760 to 40964781 21 + TSS region transcription start site region 55775
1810009J06Rik 6 40964772 to 40968427 3655 + protein coding gene RIKEN cDNA 1810009J06 gene
Gm2663 6 40995830 to 40999479 3649 - protein coding gene predicted gene 2663
Tssr60532 6 40999466 to 40999468 2 - TSS region transcription start site region 60532
Tssr60533 6 40999479 to 40999498 19 - TSS region transcription start site region 60533
Gm38015 6 41011181 to 41011368 187 - pseudogene predicted gene, 38015