Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 6:4004088-4504334

Filter by:
48 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gng11 6 4003987 to 4008445 4458 + protein coding gene guanine nucleotide binding protein (G protein), gamma 11
Cpgi17123 6 4004038 to 4004320 282 CpG island CpG island 17123
Tssr54711 6 4004089 to 4004100 11 + TSS region transcription start site region 54711
Tssr54712 6 4004185 to 4004196 11 + TSS region transcription start site region 54712
Tssr54713 6 4004212 to 4004223 11 + TSS region transcription start site region 54713
Tssr54714 6 4004241 to 4004274 33 + TSS region transcription start site region 54714
Tssr54715 6 4004299 to 4004302 3 + TSS region transcription start site region 54715
Tssr59709 6 4030894 to 4030901 7 - TSS region transcription start site region 59709
4930528H21Rik 6 4031841 to 4047584 15743 - lincRNA gene RIKEN cDNA 4930528H21 gene
Tssr59710 6 4047557 to 4047569 12 - TSS region transcription start site region 59710
Tssr59711 6 4047573 to 4047580 7 - TSS region transcription start site region 59711
Tssr54716 6 4047677 to 4047711 34 + TSS region transcription start site region 54716
Tssr59712 6 4069758 to 4069770 12 - TSS region transcription start site region 59712
Gm38760 6 4074145 to 4076570 2425 - lncRNA gene predicted gene, 38760
Bet1 6 4076899 to 4086972 10073 - protein coding gene Bet1 golgi vesicular membrane trafficking protein
Tssr59713 6 4086803 to 4086819 16 - TSS region transcription start site region 59713
Tssr59714 6 4086820 to 4086831 11 - TSS region transcription start site region 59714
Cpgi17124 6 4086831 to 4087114 283 CpG island CpG island 17124
Tssr59715 6 4086885 to 4086904 19 - TSS region transcription start site region 59715
Tssr59716 6 4086914 to 4086960 46 - TSS region transcription start site region 59716
Gm44055 6 4254088 to 4254334 246 - pseudogene predicted gene, 44055
Gm44057 6 4262754 to 4262849 95 - pseudogene predicted gene, 44057
Gm8602 6 4359028 to 4359634 606 + pseudogene predicted gene 8602
Gm44379 6 4364232 to 4364395 163 - unclassified gene predicted gene, 44379
Gm44380 6 4367774 to 4368066 292 + unclassified gene predicted gene, 44380
Gm46948 6 4380180 to 4465277 85097 - lncRNA gene predicted gene, 46948
Gm24442 6 4382878 to 4383204 326 + unclassified non-coding RNA gene predicted gene, 24442
Gm2522 6 4390920 to 4391241 321 + pseudogene predicted gene 2522
Gm33788 6 4423069 to 4446272 23203 + lncRNA gene predicted gene, 33788
D6Mit86 6 4464884 to 4465015 131 DNA segment DNA segment, Chr 6, Massachusetts Institute of Technology 86
Lith10 6 4464884 to 4465015 131 QTL lithogenic gene 10
Mobq9 6 4464884 to 4465015 131 QTL multigenic obesity QTL 9
Nhdlq5 6 4464884 to 4465015 131 QTL non-HDL QTL 5
Sig 6 4464884 to 8778488 4313604 heritable phenotypic marker sightless
Bhr8 6 4464884 to 4465015 131 QTL bronchial hyperresponsiveness 8
Cia6 6 4464884 to 87426034 82961150 QTL collagen induced arthritis QTL 6
D6Mit84 6 4464899 to 4465019 120 DNA segment DNA segment, Chr 6, Massachusetts Institute of Technology 84
Gm37883 6 4483474 to 4484198 724 - unclassified gene predicted gene, 37883
W6q4 6 4503823 to 96656149 92152326 QTL weight 6 weeks QTL 4
Egq8 6 4503823 to 96656149 92152326 QTL early growth QTL 8
D6Mit138 6 4503823 to 4503937 114 DNA segment DNA segment, Chr 6, Massachusetts Institute of Technology 138
W10q11 6 4503823 to 96656149 92152326 QTL weight 10 weeks QTL 11
W3q3 6 4503823 to 96656149 92152326 QTL weight 3 weeks QTL 3
Aaj2 6 4503823 to 48726677 44222854 QTL anxiety in A/J 2
Bmiq2 6 4503823 to 45314181 40810358 QTL body mass index QTL 2
Bmiq3 6 4503823 to 48726677 44222854 QTL body mass index QTL 3
Axtq2 6 4503823 to 48726677 44222854 QTL anxiety QTL 2
Bmiq1 6 29751334 to 4503823 -25247511 QTL body mass index QTL 1