Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 6:39828779-40419477

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30 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm7556 6 39843212 to 39844295 1083 - pseudogene predicted gene 7556
Tssr60510 6 39844357 to 39844401 44 - TSS region transcription start site region 60510
Cpgi17329 6 39871376 to 39873623 2247 CpG island CpG island 17329
Tssr55734 6 39871433 to 39871460 27 + TSS region transcription start site region 55734
Tssr55735 6 39871461 to 39871506 45 + TSS region transcription start site region 55735
Tssr55736 6 39871509 to 39871520 11 + TSS region transcription start site region 55736
Gm26833 6 39871532 to 39871971 439 - antisense lncRNA gene predicted gene, 26833
Tssr55737 6 39871551 to 39871560 9 + TSS region transcription start site region 55737
Tssr55738 6 39872208 to 39872219 11 + TSS region transcription start site region 55738
Tmem178b 6 39873271 to 40255150 381879 + protein coding gene transmembrane protein 178B
Tssr55739 6 39876864 to 39876867 3 + TSS region transcription start site region 55739
Tssr55740 6 39879617 to 39879622 5 + TSS region transcription start site region 55740
D6Mit161.1 6 39929287 to 39929422 135 DNA segment DNA segment, Chr 6, Massachusetts Institute of Technology 161.1
D6Mit161 6 39929398 to 39929531 133 DNA segment DNA segment, Chr 6, Massachusetts Institute of Technology 161
D6Mit239 6 39929402 to 39929526 124 DNA segment DNA segment, Chr 6, Massachusetts Institute of Technology 239
D6Mit161.2 6 39929498 to 39929617 119 DNA segment DNA segment, Chr 6, Massachusetts Institute of Technology 161.2
Gm37995 6 40026894 to 40028607 1713 + unclassified gene predicted gene, 37995
Tssr55741 6 40038280 to 40038285 5 + TSS region transcription start site region 55741
Tssr60511 6 40049669 to 40049717 48 - TSS region transcription start site region 60511
Gm37673 6 40098722 to 40101172 2450 + unclassified gene predicted gene, 37673
Gm26638 6 40118779 to 40129477 10698 + sense intronic lncRNA gene predicted gene, 26638
Gm26807 6 40203298 to 40209259 5961 - antisense lncRNA gene predicted gene, 26807
Tssr55742 6 40221811 to 40221823 12 + TSS region transcription start site region 55742
Gm37003 6 40226219 to 40229045 2826 + unclassified gene predicted gene, 37003
Agk 6 40325172 to 40396762 71590 + protein coding gene acylglycerol kinase
Cpgi17330 6 40325286 to 40325831 545 CpG island CpG island 17330
Tssr55743 6 40325471 to 40325501 30 + TSS region transcription start site region 55743
Tssr55744 6 40359905 to 40359940 35 + TSS region transcription start site region 55744
E330009J07Rik 6 40401375 to 40436135 34760 - protein coding gene RIKEN cDNA E330009J07 gene
Tssr60512 6 40401771 to 40401775 4 - TSS region transcription start site region 60512