Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 6:39771376-39973623

22 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Mrps33	6	39801804 to 39810936	9132	-	protein coding gene	mitochondrial ribosomal protein S33
5730402E23Rik	6	39810180 to 39810647	467		unclassified gene	RIKEN cDNA 5730402E23 gene
Cpgi17328	6	39810511 to 39811215	704		CpG island	CpG island 17328
Tssr60508	6	39810865 to 39810876	11	-	TSS region	transcription start site region 60508
Tssr60509	6	39810881 to 39810905	24	-	TSS region	transcription start site region 60509
Gm7554	6	39828200 to 39828773	573	-	pseudogene	predicted gene 7554
Gm7556	6	39843212 to 39844295	1083	-	pseudogene	predicted gene 7556
Tssr60510	6	39844357 to 39844401	44	-	TSS region	transcription start site region 60510
Cpgi17329	6	39871376 to 39873623	2247		CpG island	CpG island 17329
Tssr55734	6	39871433 to 39871460	27	+	TSS region	transcription start site region 55734
Tssr55735	6	39871461 to 39871506	45	+	TSS region	transcription start site region 55735
Tssr55736	6	39871509 to 39871520	11	+	TSS region	transcription start site region 55736
Gm26833	6	39871532 to 39871971	439	-	antisense lncRNA gene	predicted gene, 26833
Tssr55737	6	39871551 to 39871560	9	+	TSS region	transcription start site region 55737
Tssr55738	6	39872208 to 39872219	11	+	TSS region	transcription start site region 55738
Tmem178b	6	39873271 to 40255150	381879	+	protein coding gene	transmembrane protein 178B
Tssr55739	6	39876864 to 39876867	3	+	TSS region	transcription start site region 55739
Tssr55740	6	39879617 to 39879622	5	+	TSS region	transcription start site region 55740
D6Mit161.1	6	39929287 to 39929422	135		DNA segment	DNA segment, Chr 6, Massachusetts Institute of Technology 161.1
D6Mit161	6	39929398 to 39929531	133		DNA segment	DNA segment, Chr 6, Massachusetts Institute of Technology 161
D6Mit239	6	39929402 to 39929526	124		DNA segment	DNA segment, Chr 6, Massachusetts Institute of Technology 239
D6Mit161.2	6	39929498 to 39929617	119		DNA segment	DNA segment, Chr 6, Massachusetts Institute of Technology 161.2