MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 6:39625448-39825478

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Braf	6	39603237 to 39725463	122226	-	protein coding gene	Braf transforming gene
D6Mit153	6	39637674 to 39637807	133		DNA segment	DNA segment, Chr 6, Massachusetts Institute of Technology 153
Tssr60500	6	39637869 to 39637880	11	-	TSS region	transcription start site region 60500
Fth-ps2	6	39653299 to 39653788	489	-	pseudogene	ferritin heavy chain, pseudogene 2
Tssr1816	6	39653799 to 39653804	5	+	TSS region	transcription start site region 1816
Tssr60501	6	39654112 to 39654117	5	-	TSS region	transcription start site region 60501
Tssr60502	6	39705723 to 39705771	48	-	TSS region	transcription start site region 60502
Tssr60503	6	39708836 to 39708840	4	-	TSS region	transcription start site region 60503
Cpgi17327	6	39724613 to 39725717	1104		CpG island	CpG island 17327
Tssr60504	6	39725293 to 39725357	64	-	TSS region	transcription start site region 60504
Tssr60505	6	39725419 to 39725429	10	-	TSS region	transcription start site region 60505
Tssr60506	6	39725448 to 39725478	30	-	TSS region	transcription start site region 60506
Tssr60507	6	39725487 to 39725504	17	-	TSS region	transcription start site region 60507
Mrps33	6	39801804 to 39810936	9132	-	protein coding gene	mitochondrial ribosomal protein S33
5730402E23Rik	6	39810180 to 39810647	467		unclassified gene	RIKEN cDNA 5730402E23 gene
Cpgi17328	6	39810511 to 39811215	704		CpG island	CpG island 17328
Tssr60508	6	39810865 to 39810876	11	-	TSS region	transcription start site region 60508
Tssr60509	6	39810881 to 39810905	24	-	TSS region	transcription start site region 60509