Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 6:39018128-39138133

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27 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tbxas1 6 38875404 to 39084585 209181 + protein coding gene thromboxane A synthase 1, platelet
Gm38489 6 39019198 to 39043829 24631 - lncRNA gene predicted gene, 38489
Tssr55704 6 39021665 to 39021676 11 + TSS region transcription start site region 55704
Tssr55705 6 39024305 to 39024307 2 + TSS region transcription start site region 55705
Tssr55706 6 39033383 to 39033401 18 + TSS region transcription start site region 55706
Tssr55707 6 39033499 to 39033511 12 + TSS region transcription start site region 55707
Tssr55708 6 39035542 to 39035572 30 + TSS region transcription start site region 55708
Gm46989 6 39044166 to 39056520 12354 - lncRNA gene predicted gene, 46989
Tssr55709 6 39044384 to 39044397 13 + TSS region transcription start site region 55709
Tssr55710 6 39044399 to 39044411 12 + TSS region transcription start site region 55710
Tssr60446 6 39049050 to 39049064 14 - TSS region transcription start site region 60446
1700025N23Rik 6 39063879 to 39067586 3707 - antisense lncRNA gene RIKEN cDNA 1700025N23 gene
Tssr60447 6 39067580 to 39067591 11 - TSS region transcription start site region 60447
Tssr60448 6 39078128 to 39078133 5 - TSS region transcription start site region 60448
Parp12 6 39086412 to 39118349 31937 - protein coding gene poly (ADP-ribose) polymerase family, member 12
Tssr60449 6 39087521 to 39087540 19 - TSS region transcription start site region 60449
Tssr60450 6 39087629 to 39087643 14 - TSS region transcription start site region 60450
Tssr60451 6 39089006 to 39089020 14 - TSS region transcription start site region 60451
Cpgi17318 6 39117531 to 39119047 1516 CpG island CpG island 17318
Tssr60452 6 39118164 to 39118177 13 - TSS region transcription start site region 60452
Tssr60453 6 39118182 to 39118207 25 - TSS region transcription start site region 60453
Tssr60454 6 39118211 to 39118252 41 - TSS region transcription start site region 60454
Tssr55711 6 39118268 to 39118342 74 + TSS region transcription start site region 55711
4930599N23Rik 6 39118473 to 39148312 29839 + antisense lncRNA gene RIKEN cDNA 4930599N23 gene
Gm42963 6 39125165 to 39126381 1216 - unclassified gene predicted gene 42963
Tssr55712 6 39126619 to 39126644 25 + TSS region transcription start site region 55712
Kdm7a 6 39136620 to 39206773 70153 - protein coding gene lysine (K)-specific demethylase 7A