Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 6:38876317-39006328

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33 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cia6b 6 34734663 to 38969603 4234940 QTL collagen induced arthritis QTL 6b
Cpgi17317 6 38875435 to 38877034 1599 CpG island CpG island 17317
Gm46988 6 38876111 to 38885050 8939 + protein coding gene predicted gene, 46988
Tssr60442 6 38876274 to 38876350 76 - TSS region transcription start site region 60442
Tssr60443 6 38876502 to 38876515 13 - TSS region transcription start site region 60443
Tssr60444 6 38876518 to 38876529 11 - TSS region transcription start site region 60444
Tssr60445 6 38876532 to 38876541 9 - TSS region transcription start site region 60445
Tssr55684 6 38892436 to 38892452 16 + TSS region transcription start site region 55684
Gm42962 6 38917098 to 38984325 67227 - antisense lncRNA gene predicted gene 42962
Tssr55685 6 38918461 to 38918474 13 + TSS region transcription start site region 55685
Tssr55686 6 38918953 to 38918960 7 + TSS region transcription start site region 55686
Tssr55687 6 38918969 to 38918995 26 + TSS region transcription start site region 55687
Tssr55688 6 38918996 to 38919029 33 + TSS region transcription start site region 55688
Tssr55689 6 38919042 to 38919054 12 + TSS region transcription start site region 55689
Tssr55690 6 38919061 to 38919074 13 + TSS region transcription start site region 55690
Tssr55691 6 38919089 to 38919100 11 + TSS region transcription start site region 55691
Tssr1815 6 38921505 to 38921513 8 + TSS region transcription start site region 1815
Tssr55692 6 38923167 to 38923171 4 + TSS region transcription start site region 55692
Tssr55693 6 38934071 to 38934084 13 + TSS region transcription start site region 55693
Tssr55694 6 38941317 to 38941328 11 + TSS region transcription start site region 55694
Tssr55695 6 38941373 to 38941386 13 + TSS region transcription start site region 55695
Tssr55696 6 38941393 to 38941408 15 + TSS region transcription start site region 55696
Gm33767 6 38944371 to 38950281 5910 - lncRNA gene predicted gene, 33767
Tssr55697 6 38950574 to 38950586 12 + TSS region transcription start site region 55697
Tssr55698 6 38951860 to 38951891 31 + TSS region transcription start site region 55698
D6Mit222 6 38957512 to 38957659 147 DNA segment DNA segment, Chr 6, Massachusetts Institute of Technology 222
D6Mit90 6 38969475 to 38969603 128 DNA segment DNA segment, Chr 6, Massachusetts Institute of Technology 90
Tssr55699 6 38980996 to 38981004 8 + TSS region transcription start site region 55699
Tssr55700 6 38983303 to 38983317 14 + TSS region transcription start site region 55700
Tssr55701 6 38983325 to 38983338 13 + TSS region transcription start site region 55701
Gm38688 6 38988836 to 39006437 17601 - lncRNA gene predicted gene, 38688
Tssr55702 6 39002685 to 39002697 12 + TSS region transcription start site region 55702
Tssr55703 6 39004035 to 39004050 15 + TSS region transcription start site region 55703