Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 6:38699194-38939220

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41 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Hipk2 6 38694390 to 38876165 181775 - protein coding gene homeodomain interacting protein kinase 2
Gm38496 6 38699744 to 38741900 42156 + lncRNA gene predicted gene, 38496
Tssr55681 6 38702814 to 38702854 40 + TSS region transcription start site region 55681
Tssr60427 6 38703532 to 38703544 12 - TSS region transcription start site region 60427
Tssr60428 6 38716071 to 38716080 9 - TSS region transcription start site region 60428
Tssr60429 6 38737468 to 38737483 15 - TSS region transcription start site region 60429
Tssr60430 6 38745748 to 38745758 10 - TSS region transcription start site region 60430
4930502C15Rik 6 38752238 to 38780484 28246 + lncRNA gene RIKEN cDNA 4930502C15 gene
D6Mit80 6 38756863 to 38757001 138 DNA segment DNA segment, Chr 6, Massachusetts Institute of Technology 80
Tssr60431 6 38782266 to 38782294 28 - TSS region transcription start site region 60431
Tssr60432 6 38819194 to 38819220 26 - TSS region transcription start site region 60432
Tssr60433 6 38819283 to 38819294 11 - TSS region transcription start site region 60433
Tssr60434 6 38837266 to 38837268 2 - TSS region transcription start site region 60434
Tssr60435 6 38837305 to 38837316 11 - TSS region transcription start site region 60435
Tssr55682 6 38843438 to 38843449 11 + TSS region transcription start site region 55682
Tssr60436 6 38863598 to 38863602 4 - TSS region transcription start site region 60436
Tssr55683 6 38874802 to 38874813 11 + TSS region transcription start site region 55683
Tbxas1 6 38875404 to 39084585 209181 + protein coding gene thromboxane A synthase 1, platelet
Cpgi17317 6 38875435 to 38877034 1599 CpG island CpG island 17317
Tssr60437 6 38875873 to 38875880 7 - TSS region transcription start site region 60437
Tssr60438 6 38875904 to 38875920 16 - TSS region transcription start site region 60438
Tssr60439 6 38875923 to 38875937 14 - TSS region transcription start site region 60439
Tssr60440 6 38875965 to 38875986 21 - TSS region transcription start site region 60440
Gm46988 6 38876111 to 38885050 8939 + protein coding gene predicted gene, 46988
Tssr60441 6 38876163 to 38876234 71 - TSS region transcription start site region 60441
Tssr60442 6 38876274 to 38876350 76 - TSS region transcription start site region 60442
Tssr60443 6 38876502 to 38876515 13 - TSS region transcription start site region 60443
Tssr60444 6 38876518 to 38876529 11 - TSS region transcription start site region 60444
Tssr60445 6 38876532 to 38876541 9 - TSS region transcription start site region 60445
Tssr55684 6 38892436 to 38892452 16 + TSS region transcription start site region 55684
Gm42962 6 38917098 to 38984325 67227 - antisense lncRNA gene predicted gene 42962
Tssr55685 6 38918461 to 38918474 13 + TSS region transcription start site region 55685
Tssr55686 6 38918953 to 38918960 7 + TSS region transcription start site region 55686
Tssr55687 6 38918969 to 38918995 26 + TSS region transcription start site region 55687
Tssr55688 6 38918996 to 38919029 33 + TSS region transcription start site region 55688
Tssr55689 6 38919042 to 38919054 12 + TSS region transcription start site region 55689
Tssr55690 6 38919061 to 38919074 13 + TSS region transcription start site region 55690
Tssr55691 6 38919089 to 38919100 11 + TSS region transcription start site region 55691
Tssr1815 6 38921505 to 38921513 8 + TSS region transcription start site region 1815
Tssr55692 6 38923167 to 38923171 4 + TSS region transcription start site region 55692
Tssr55693 6 38934071 to 38934084 13 + TSS region transcription start site region 55693