Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 6:38607814-38797854

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36 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Luc7l2 6 38551334 to 38609470 58136 + protein coding gene LUC7-like 2 (S. cerevisiae)
Tssr55674 6 38608969 to 38608976 7 + TSS region transcription start site region 55674
Tssr55675 6 38609015 to 38609023 8 + TSS region transcription start site region 55675
9330153N18Rik 6 38610048 to 38610963 915 unclassified gene RIKEN cDNA 9330153N18 gene
Tssr55676 6 38611111 to 38611121 10 + TSS region transcription start site region 55676
Klrg2 6 38625693 to 38637242 11549 - protein coding gene killer cell lectin-like receptor subfamily G, member 2
Cpgi17314 6 38636001 to 38637497 1496 CpG island CpG island 17314
Tssr60417 6 38637173 to 38637214 41 - TSS region transcription start site region 60417
Tssr60418 6 38637220 to 38637247 27 - TSS region transcription start site region 60418
Cpgi17315 6 38662639 to 38663817 1178 CpG island CpG island 17315
Tssr55677 6 38663019 to 38663060 41 + TSS region transcription start site region 55677
Tssr55678 6 38663061 to 38663119 58 + TSS region transcription start site region 55678
Clec2l 6 38663069 to 38680864 17795 + protein coding gene C-type lectin domain family 2, member L
Tssr55679 6 38663278 to 38663296 18 + TSS region transcription start site region 55679
Cplaq9 6 38669625 to 92607450 53937825 QTL circadian period of locomotor activity 9
D6Mit91 6 38669625 to 38669724 99 DNA segment DNA segment, Chr 6, Massachusetts Institute of Technology 91
Tssr55680 6 38674653 to 38674655 2 + TSS region transcription start site region 55680
Cpgi17316 6 38676829 to 38676982 153 CpG island CpG island 17316
Tssr60419 6 38688022 to 38688032 10 - TSS region transcription start site region 60419
Tssr60420 6 38688108 to 38688132 24 - TSS region transcription start site region 60420
Tssr60421 6 38689045 to 38689073 28 - TSS region transcription start site region 60421
Tssr60422 6 38689531 to 38689555 24 - TSS region transcription start site region 60422
Tssr60423 6 38691876 to 38691899 23 - TSS region transcription start site region 60423
Tssr60424 6 38693039 to 38693041 2 - TSS region transcription start site region 60424
Tssr60425 6 38693489 to 38693520 31 - TSS region transcription start site region 60425
Hipk2 6 38694390 to 38876165 181775 - protein coding gene homeodomain interacting protein kinase 2
Tssr60426 6 38695441 to 38695469 28 - TSS region transcription start site region 60426
Gm38496 6 38699744 to 38741900 42156 + lncRNA gene predicted gene, 38496
Tssr55681 6 38702814 to 38702854 40 + TSS region transcription start site region 55681
Tssr60427 6 38703532 to 38703544 12 - TSS region transcription start site region 60427
Tssr60428 6 38716071 to 38716080 9 - TSS region transcription start site region 60428
Tssr60429 6 38737468 to 38737483 15 - TSS region transcription start site region 60429
Tssr60430 6 38745748 to 38745758 10 - TSS region transcription start site region 60430
4930502C15Rik 6 38752238 to 38780484 28246 + lncRNA gene RIKEN cDNA 4930502C15 gene
D6Mit80 6 38756863 to 38757001 138 DNA segment DNA segment, Chr 6, Massachusetts Institute of Technology 80
Tssr60431 6 38782266 to 38782294 28 - TSS region transcription start site region 60431