Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 6:38514861-38559449

22 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Cpgi17311	6	38533405 to 38533816	411		CpG island	CpG island 17311
Tssr60414	6	38533640 to 38533669	29	-	TSS region	transcription start site region 60414
n-TRcct1	6	38533931 to 38534003	72	+	tRNA gene	nuclear encoded tRNA arginine 1 (anticodon CCT)
Cpgi17312	6	38534558 to 38535491	933		CpG island	CpG island 17312
Tssr55653	6	38534833 to 38534872	39	+	TSS region	transcription start site region 55653
Fmc1	6	38534861 to 38539449	4588	+	protein coding gene	formation of mitochondrial complex V assembly factor 1
Gm15697	6	38542303 to 38546074	3771	-	pseudogene	predicted gene 15697
D630014H12Rik	6	38550424 to 38551252	828		unclassified gene	RIKEN cDNA D630014H12 gene
Cpgi17313	6	38550663 to 38552315	1652		CpG island	CpG island 17313
Tssr55654	6	38550773 to 38550807	34	+	TSS region	transcription start site region 55654
Tssr60415	6	38551212 to 38551256	44	-	TSS region	transcription start site region 60415
Luc7l2	6	38551334 to 38609470	58136	+	protein coding gene	LUC7-like 2 (S. cerevisiae)
Tssr55655	6	38551432 to 38551493	61	+	TSS region	transcription start site region 55655
Tssr55656	6	38551503 to 38551536	33	+	TSS region	transcription start site region 55656
Gm26699	6	38551531 to 38554007	2476	-	lincRNA gene	predicted gene, 26699
Tssr55657	6	38551537 to 38551550	13	+	TSS region	transcription start site region 55657
Tssr55658	6	38551556 to 38551569	13	+	TSS region	transcription start site region 55658
Tssr55659	6	38551786 to 38551851	65	+	TSS region	transcription start site region 55659
Tssr60416	6	38551992 to 38552027	35	-	TSS region	transcription start site region 60416
Tssr55660	6	38552892 to 38552896	4	+	TSS region	transcription start site region 55660
Tssr55661	6	38557047 to 38557066	19	+	TSS region	transcription start site region 55661
Tssr55662	6	38558948 to 38558962	14	+	TSS region	transcription start site region 55662