Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 6:38428937-38598947

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47 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
1700021L22Rik 6 38433036 to 38433782 746 unclassified gene RIKEN cDNA 1700021L22 gene
Cpgi17310 6 38433140 to 38435076 1936 CpG island CpG island 17310
Tssr60412 6 38433643 to 38433661 18 - TSS region transcription start site region 60412
Tssr60413 6 38433719 to 38433732 13 - TSS region transcription start site region 60413
Tssr55646 6 38433851 to 38433863 12 + TSS region transcription start site region 55646
Tssr55647 6 38433869 to 38433882 13 + TSS region transcription start site region 55647
Tssr55648 6 38433913 to 38433965 52 + TSS region transcription start site region 55648
Ubn2 6 38433925 to 38512763 78838 + protein coding gene ubinuclein 2
Tssr55649 6 38434336 to 38434382 46 + TSS region transcription start site region 55649
Tssr55650 6 38441954 to 38441958 4 + TSS region transcription start site region 55650
E430026H10Rik 6 38445358 to 38447048 1690 unclassified gene RIKEN cDNA E430026H10 gene
Tssr55651 6 38501826 to 38501830 4 + TSS region transcription start site region 55651
Mir7670 6 38507325 to 38507393 68 + miRNA gene microRNA 7670
D6Mit154 6 38512024 to 38512131 107 DNA segment DNA segment, Chr 6, Massachusetts Institute of Technology 154
Tssr55652 6 38513937 to 38513947 10 + TSS region transcription start site region 55652
Cpgi17311 6 38533405 to 38533816 411 CpG island CpG island 17311
Tssr60414 6 38533640 to 38533669 29 - TSS region transcription start site region 60414
n-TRcct1 6 38533931 to 38534003 72 + tRNA gene nuclear encoded tRNA arginine 1 (anticodon CCT)
Cpgi17312 6 38534558 to 38535491 933 CpG island CpG island 17312
Tssr55653 6 38534833 to 38534872 39 + TSS region transcription start site region 55653
Fmc1 6 38534861 to 38539449 4588 + protein coding gene formation of mitochondrial complex V assembly factor 1
Gm15697 6 38542303 to 38546074 3771 - pseudogene predicted gene 15697
D630014H12Rik 6 38550424 to 38551252 828 unclassified gene RIKEN cDNA D630014H12 gene
Cpgi17313 6 38550663 to 38552315 1652 CpG island CpG island 17313
Tssr55654 6 38550773 to 38550807 34 + TSS region transcription start site region 55654
Tssr60415 6 38551212 to 38551256 44 - TSS region transcription start site region 60415
Luc7l2 6 38551334 to 38609470 58136 + protein coding gene LUC7-like 2 (S. cerevisiae)
Tssr55655 6 38551432 to 38551493 61 + TSS region transcription start site region 55655
Tssr55656 6 38551503 to 38551536 33 + TSS region transcription start site region 55656
Gm26699 6 38551531 to 38554007 2476 - lincRNA gene predicted gene, 26699
Tssr55657 6 38551537 to 38551550 13 + TSS region transcription start site region 55657
Tssr55658 6 38551556 to 38551569 13 + TSS region transcription start site region 55658
Tssr55659 6 38551786 to 38551851 65 + TSS region transcription start site region 55659
Tssr60416 6 38551992 to 38552027 35 - TSS region transcription start site region 60416
Tssr55660 6 38552892 to 38552896 4 + TSS region transcription start site region 55660
Tssr55661 6 38557047 to 38557066 19 + TSS region transcription start site region 55661
Tssr55662 6 38558948 to 38558962 14 + TSS region transcription start site region 55662
Tssr55663 6 38560216 to 38560236 20 + TSS region transcription start site region 55663
Tssr55664 6 38561229 to 38561236 7 + TSS region transcription start site region 55664
Tssr55665 6 38562263 to 38562297 34 + TSS region transcription start site region 55665
Tssr55666 6 38567527 to 38567531 4 + TSS region transcription start site region 55666
Tssr55667 6 38577036 to 38577041 5 + TSS region transcription start site region 55667
Tssr55668 6 38581981 to 38581990 9 + TSS region transcription start site region 55668
Tssr55669 6 38585810 to 38585819 9 + TSS region transcription start site region 55669
Tssr55670 6 38592736 to 38592748 12 + TSS region transcription start site region 55670
Tssr55671 6 38592937 to 38592940 3 + TSS region transcription start site region 55671
Tssr55672 6 38595632 to 38595641 9 + TSS region transcription start site region 55672