Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 6:37546684-38066709

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37 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Akr1d1 6 37530173 to 37568815 38642 + protein coding gene aldo-keto reductase family 1, member D1
Tssr60359 6 37604183 to 37604186 3 - TSS region transcription start site region 60359
Cpgi17303 6 37610481 to 37611073 592 CpG island CpG island 17303
Ybx1-ps2 6 37686239 to 37687195 956 - pseudogene Y box protein 1, pseudogene 2
Cpgi17304 6 37687000 to 37687302 302 CpG island CpG island 17304
Tssr55618 6 37706044 to 37706048 4 + TSS region transcription start site region 55618
Gm38791 6 37714655 to 37734381 19726 + lncRNA gene predicted gene, 38791
Tssr55619 6 37732625 to 37732629 4 + TSS region transcription start site region 55619
Tssr55620 6 37805972 to 37805979 7 + TSS region transcription start site region 55620
Atp6v0c-ps2 6 37806086 to 37806550 464 + pseudogene ATPase, H+ transporting, lysosomal V0 subunit C, pseudogene 2
Tssr55621 6 37806298 to 37806343 45 + TSS region transcription start site region 55621
Tssr55622 6 37806462 to 37806498 36 + TSS region transcription start site region 55622
Tssr55623 6 37806684 to 37806709 25 + TSS region transcription start site region 55623
Gm7492 6 37865840 to 37866564 724 - pseudogene predicted gene 7492
Cpgi17305 6 37870335 to 37871775 1440 CpG island CpG island 17305
Tssr60360 6 37870423 to 37870467 44 - TSS region transcription start site region 60360
Tssr55624 6 37870708 to 37870720 12 + TSS region transcription start site region 55624
Tssr55625 6 37870786 to 37870882 96 + TSS region transcription start site region 55625
Trim24 6 37870811 to 37966296 95485 + protein coding gene tripartite motif-containing 24
Tssr55626 6 37870893 to 37870927 34 + TSS region transcription start site region 55626
Tssr55627 6 37870928 to 37870956 28 + TSS region transcription start site region 55627
Tssr55628 6 37870962 to 37870973 11 + TSS region transcription start site region 55628
Tssr55629 6 37870995 to 37871015 20 + TSS region transcription start site region 55629
Tssr60361 6 37871327 to 37871344 17 - TSS region transcription start site region 60361
Tssr60362 6 37871477 to 37871490 13 - TSS region transcription start site region 60362
D6Jpk1 6 37893978 to 37894052 74 DNA segment DNA segment, Chr 6, Japan, Kominami 1
Tssr55630 6 37900477 to 37900487 10 + TSS region transcription start site region 55630
Tssr55631 6 37900502 to 37900520 18 + TSS region transcription start site region 55631
9030601B04Rik 6 37941015 to 37942419 1404 unclassified gene RIKEN cDNA 9030601B04 gene
D6Ertd160e 6 37980926 to 37982763 1837 unclassified gene DNA segment, Chr 6, ERATO Doi 160, expressed
Svopl 6 37983739 to 38046996 63257 - protein coding gene SV2 related protein homolog (rat)-like
Gm18401 6 37994665 to 37995316 651 - pseudogene predicted gene, 18401
Tssr60363 6 38002998 to 38003000 2 - TSS region transcription start site region 60363
Tssr60364 6 38023281 to 38023292 11 - TSS region transcription start site region 60364
Gm33494 6 38032659 to 38035509 2850 + lncRNA gene predicted gene, 33494
Tssr60365 6 38046994 to 38046998 4 - TSS region transcription start site region 60365
Atp6v0a4 6 38048483 to 38124586 76103 - protein coding gene ATPase, H+ transporting, lysosomal V0 subunit A4