Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 6:37536015-38347419

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90 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Akr1d1 6 37530173 to 37568815 38642 + protein coding gene aldo-keto reductase family 1, member D1
Tssr55617 6 37539714 to 37539726 12 + TSS region transcription start site region 55617
Gm7463 6 37541414 to 37541960 546 + pseudogene predicted gene 7463
Tssr60359 6 37604183 to 37604186 3 - TSS region transcription start site region 60359
Cpgi17303 6 37610481 to 37611073 592 CpG island CpG island 17303
Ybx1-ps2 6 37686239 to 37687195 956 - pseudogene Y box protein 1, pseudogene 2
Cpgi17304 6 37687000 to 37687302 302 CpG island CpG island 17304
Tssr55618 6 37706044 to 37706048 4 + TSS region transcription start site region 55618
Gm38791 6 37714655 to 37734381 19726 + lncRNA gene predicted gene, 38791
Tssr55619 6 37732625 to 37732629 4 + TSS region transcription start site region 55619
Tssr55620 6 37805972 to 37805979 7 + TSS region transcription start site region 55620
Atp6v0c-ps2 6 37806086 to 37806550 464 + pseudogene ATPase, H+ transporting, lysosomal V0 subunit C, pseudogene 2
Tssr55621 6 37806298 to 37806343 45 + TSS region transcription start site region 55621
Tssr55622 6 37806462 to 37806498 36 + TSS region transcription start site region 55622
Tssr55623 6 37806684 to 37806709 25 + TSS region transcription start site region 55623
Gm7492 6 37865840 to 37866564 724 - pseudogene predicted gene 7492
Cpgi17305 6 37870335 to 37871775 1440 CpG island CpG island 17305
Tssr60360 6 37870423 to 37870467 44 - TSS region transcription start site region 60360
Tssr55624 6 37870708 to 37870720 12 + TSS region transcription start site region 55624
Tssr55625 6 37870786 to 37870882 96 + TSS region transcription start site region 55625
Trim24 6 37870811 to 37966296 95485 + protein coding gene tripartite motif-containing 24
Tssr55626 6 37870893 to 37870927 34 + TSS region transcription start site region 55626
Tssr55627 6 37870928 to 37870956 28 + TSS region transcription start site region 55627
Tssr55628 6 37870962 to 37870973 11 + TSS region transcription start site region 55628
Tssr55629 6 37870995 to 37871015 20 + TSS region transcription start site region 55629
Tssr60361 6 37871327 to 37871344 17 - TSS region transcription start site region 60361
Tssr60362 6 37871477 to 37871490 13 - TSS region transcription start site region 60362
D6Jpk1 6 37893978 to 37894052 74 DNA segment DNA segment, Chr 6, Japan, Kominami 1
Tssr55630 6 37900477 to 37900487 10 + TSS region transcription start site region 55630
Tssr55631 6 37900502 to 37900520 18 + TSS region transcription start site region 55631
9030601B04Rik 6 37941015 to 37942419 1404 unclassified gene RIKEN cDNA 9030601B04 gene
D6Ertd160e 6 37980926 to 37982763 1837 unclassified gene DNA segment, Chr 6, ERATO Doi 160, expressed
Svopl 6 37983739 to 38046996 63257 - protein coding gene SV2 related protein homolog (rat)-like
Gm18401 6 37994665 to 37995316 651 - pseudogene predicted gene, 18401
Tssr60363 6 38002998 to 38003000 2 - TSS region transcription start site region 60363
Tssr60364 6 38023281 to 38023292 11 - TSS region transcription start site region 60364
Gm33494 6 38032659 to 38035509 2850 + lncRNA gene predicted gene, 33494
Tssr60365 6 38046994 to 38046998 4 - TSS region transcription start site region 60365
Atp6v0a4 6 38048483 to 38124586 76103 - protein coding gene ATPase, H+ transporting, lysosomal V0 subunit A4
Tssr60366 6 38096932 to 38096946 14 - TSS region transcription start site region 60366
Tssr60367 6 38096949 to 38096973 24 - TSS region transcription start site region 60367
Tssr60368 6 38097031 to 38097041 10 - TSS region transcription start site region 60368
Tssr60369 6 38097044 to 38097076 32 - TSS region transcription start site region 60369
Tssr55632 6 38109320 to 38109402 82 + TSS region transcription start site region 55632
Tmem213 6 38109353 to 38115806 6453 + protein coding gene transmembrane protein 213
Tssr55633 6 38109408 to 38109417 9 + TSS region transcription start site region 55633
Tssr60370 6 38109548 to 38109574 26 - TSS region transcription start site region 60370
Tssr60371 6 38110420 to 38110425 5 - TSS region transcription start site region 60371
Gm23231 6 38118383 to 38118486 103 + snRNA gene predicted gene, 23231
D630045J12Rik 6 38123174 to 38254009 130835 - protein coding gene RIKEN cDNA D630045J12 gene
Tssr60372 6 38124449 to 38124456 7 - TSS region transcription start site region 60372
Tssr60373 6 38124465 to 38124473 8 - TSS region transcription start site region 60373
Tssr60374 6 38124477 to 38124499 22 - TSS region transcription start site region 60374
Tssr60375 6 38124502 to 38124538 36 - TSS region transcription start site region 60375
Tssr60376 6 38124541 to 38124557 16 - TSS region transcription start site region 60376
Tssr60377 6 38124568 to 38124595 27 - TSS region transcription start site region 60377
Tssr60378 6 38125514 to 38125517 3 - TSS region transcription start site region 60378
Tssr60379 6 38128077 to 38128080 3 - TSS region transcription start site region 60379
Tssr60380 6 38128227 to 38128248 21 - TSS region transcription start site region 60380
Tssr60381 6 38147369 to 38147379 10 - TSS region transcription start site region 60381
Tssr60382 6 38147380 to 38147407 27 - TSS region transcription start site region 60382
Tssr60383 6 38147421 to 38147440 19 - TSS region transcription start site region 60383
Tssr60384 6 38147441 to 38147447 6 - TSS region transcription start site region 60384
Tssr60385 6 38147449 to 38147457 8 - TSS region transcription start site region 60385
D6Mit298 6 38160857 to 38160980 123 DNA segment DNA segment, Chr 6, Massachusetts Institute of Technology 298
Tssr60386 6 38195380 to 38195427 47 - TSS region transcription start site region 60386
Cpgi17306 6 38253415 to 38254763 1348 CpG island CpG island 17306
Tssr60387 6 38254087 to 38254108 21 - TSS region transcription start site region 60387
Tssr60388 6 38254109 to 38254155 46 - TSS region transcription start site region 60388
Tssr60389 6 38254214 to 38254267 53 - TSS region transcription start site region 60389
Tssr60390 6 38254274 to 38254327 53 - TSS region transcription start site region 60390
Tssr55634 6 38284470 to 38284472 2 + TSS region transcription start site region 55634
Gm7504 6 38284526 to 38284949 423 + pseudogene predicted gene 7504
Zc3hav1l 6 38287396 to 38299259 11863 - protein coding gene zinc finger CCCH-type, antiviral 1-like
Cpgi17307 6 38298426 to 38299546 1120 CpG island CpG island 17307
Tssr60391 6 38299222 to 38299233 11 - TSS region transcription start site region 60391
Tssr60392 6 38299236 to 38299290 54 - TSS region transcription start site region 60392
Zc3hav1 6 38305286 to 38354603 49317 - protein coding gene zinc finger CCCH type, antiviral 1
Tssr60393 6 38306303 to 38306305 2 - TSS region transcription start site region 60393
Tssr60394 6 38306685 to 38306692 7 - TSS region transcription start site region 60394
Tssr60395 6 38306749 to 38306768 19 - TSS region transcription start site region 60395
Tssr60396 6 38307252 to 38307311 59 - TSS region transcription start site region 60396
Tssr60397 6 38308264 to 38308267 3 - TSS region transcription start site region 60397
Tssr60398 6 38311686 to 38311697 11 - TSS region transcription start site region 60398
Tssr60399 6 38319745 to 38319758 13 - TSS region transcription start site region 60399
Tssr60400 6 38341200 to 38341205 5 - TSS region transcription start site region 60400
Tssr60401 6 38341855 to 38341869 14 - TSS region transcription start site region 60401
Tssr60402 6 38343066 to 38343074 8 - TSS region transcription start site region 60402
Tssr60403 6 38345926 to 38345938 12 - TSS region transcription start site region 60403
Tssr55635 6 38346051 to 38346052 1 + TSS region transcription start site region 55635