Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 6:35790415-36600419

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34 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi17299 6 35816777 to 35816973 196 CpG island CpG island 17299
Tssr1813 6 35882529 to 35882536 7 + TSS region transcription start site region 1813
9030409K20Rik 6 35883281 to 35885441 2160 unclassified gene RIKEN cDNA 9030409K20 gene
Gm43442 6 35926711 to 35927124 413 + pseudogene predicted gene 43442
Gm38790 6 35965879 to 35999695 33816 - lncRNA gene predicted gene, 38790
Gm23273 6 35975330 to 35975464 134 + snoRNA gene predicted gene, 23273
Tssr60316 6 35989016 to 35989027 11 - TSS region transcription start site region 60316
Tssr60317 6 35994652 to 35994655 3 - TSS region transcription start site region 60317
Tssr55594 6 35996994 to 35997007 13 + TSS region transcription start site region 55594
Tssr55595 6 35997011 to 35997034 23 + TSS region transcription start site region 55595
Tssr55596 6 35997080 to 35997091 11 + TSS region transcription start site region 55596
Tssr60318 6 35998666 to 35998674 8 - TSS region transcription start site region 60318
Tssr60319 6 36179774 to 36179804 30 - TSS region transcription start site region 60319
Gm43443 6 36186707 to 36189099 2392 - unclassified gene predicted gene 43443
Tssr1814 6 36195415 to 36195419 4 - TSS region transcription start site region 1814
9330158H04Rik 6 36333138 to 36388234 55096 - lincRNA gene RIKEN cDNA 9330158H04 gene
Tssr55597 6 36365004 to 36365005 1 + TSS region transcription start site region 55597
Tssr60320 6 36387845 to 36387861 16 - TSS region transcription start site region 60320
Cpgi17300 6 36387867 to 36388821 954 CpG island CpG island 17300
Tssr55598 6 36387967 to 36388027 60 + TSS region transcription start site region 55598
Tssr55599 6 36388039 to 36388053 14 + TSS region transcription start site region 55599
Tssr55600 6 36388055 to 36388070 15 + TSS region transcription start site region 55600
Chrm2 6 36388084 to 36528414 140330 + protein coding gene cholinergic receptor, muscarinic 2, cardiac
Tssr55601 6 36388186 to 36388207 21 + TSS region transcription start site region 55601
Tssr55602 6 36388209 to 36388221 12 + TSS region transcription start site region 55602
Tssr55603 6 36388581 to 36388616 35 + TSS region transcription start site region 55603
Tssr60321 6 36388915 to 36388918 3 - TSS region transcription start site region 60321
Tssr55604 6 36389154 to 36389173 19 + TSS region transcription start site region 55604
Tssr55605 6 36389321 to 36389334 13 + TSS region transcription start site region 55605
Tssr55606 6 36389389 to 36389407 18 + TSS region transcription start site region 55606
Tssr55607 6 36389408 to 36389419 11 + TSS region transcription start site region 55607
Tssr55608 6 36389431 to 36389440 9 + TSS region transcription start site region 55608
Mir490 6 36421742 to 36421825 83 + miRNA gene microRNA 490
Gm43441 6 36587777 to 36587981 204 + pseudogene predicted gene 43441