Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 6:3558618-3968624

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19 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Vps50 6 3498393 to 3603531 105138 + protein coding gene VPS50 EARP/GARPII complex subunit
Tssr1767 6 3570559 to 3570564 5 - TSS region transcription start site region 1767
Tssr59699 6 3570570 to 3570583 13 - TSS region transcription start site region 59699
Tssr54700 6 3574274 to 3574278 4 + TSS region transcription start site region 54700
Gm43294 6 3583814 to 3586303 2489 + unclassified gene predicted gene 43294
Calcr 6 3685720 to 3764732 79012 - protein coding gene calcitonin receptor
Mir653 6 3721301 to 3721385 84 - miRNA gene microRNA 653
Mir489 6 3721897 to 3722003 106 - miRNA gene microRNA 489
Cpgi17121 6 3763360 to 3764178 818 CpG island CpG island 17121
Tssr59700 6 3763618 to 3763624 6 - TSS region transcription start site region 59700
Gm33576 6 3763799 to 3807425 43626 + lncRNA gene predicted gene, 33576
Tssr54701 6 3763846 to 3763857 11 + TSS region transcription start site region 54701
Gm44221 6 3863049 to 3863436 387 - pseudogene predicted gene, 44221
Tfpi2 6 3962595 to 3988919 26324 - protein coding gene tissue factor pathway inhibitor 2
Tssr59701 6 3966406 to 3966409 3 - TSS region transcription start site region 59701
Cpgi17122 6 3968149 to 3968492 343 CpG island CpG island 17122
Tssr59702 6 3968364 to 3968381 17 - TSS region transcription start site region 59702
Tssr59703 6 3968395 to 3968417 22 - TSS region transcription start site region 59703
Tssr59704 6 3968571 to 3968610 39 - TSS region transcription start site region 59704