Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 6:35231777-36401973

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98 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Nup205 6 35177616 to 35247599 69983 + protein coding gene nucleoporin 205
Tssr55585 6 35236512 to 35236556 44 + TSS region transcription start site region 55585
Gm23435 6 35243595 to 35243750 155 + snRNA gene predicted gene, 23435
D6Mit1007 6 35246334 to 35246660 326 DNA segment DNA segment, Chr 6, Massachusetts Institute of Technology 1007
Cpgi17294 6 35252410 to 35253307 897 CpG island CpG island 17294
Tssr55586 6 35252670 to 35252681 11 + TSS region transcription start site region 55586
Tssr55587 6 35252692 to 35252717 25 + TSS region transcription start site region 55587
1810058I24Rik 6 35252699 to 35262059 9360 + lincRNA gene RIKEN cDNA 1810058I24 gene
Tssr55588 6 35252724 to 35252752 28 + TSS region transcription start site region 55588
Tssr60278 6 35253091 to 35253104 13 - TSS region transcription start site region 60278
Tssr60279 6 35256798 to 35256815 17 - TSS region transcription start site region 60279
Tssr55589 6 35261275 to 35261291 16 + TSS region transcription start site region 55589
Tssr55590 6 35261362 to 35261413 51 + TSS region transcription start site region 55590
Tssr55591 6 35266108 to 35266113 5 + TSS region transcription start site region 55591
Slc13a4 6 35267953 to 35308126 40173 - protein coding gene solute carrier family 13 (sodium/sulfate symporters), member 4
Cpgi17295 6 35270323 to 35270531 208 CpG island CpG island 17295
Cpgi17296 6 35307367 to 35307529 162 CpG island CpG island 17296
Tssr60280 6 35307944 to 35307949 5 - TSS region transcription start site region 60280
Tssr60281 6 35308110 to 35308136 26 - TSS region transcription start site region 60281
Fam180a 6 35312746 to 35326141 13395 - protein coding gene family with sequence similarity 180, member A
Gm38788 6 35313154 to 35322319 9165 + lncRNA gene predicted gene, 38788
D6Mit77 6 35324650 to 35324774 124 DNA segment DNA segment, Chr 6, Massachusetts Institute of Technology 77
Tssr60282 6 35325999 to 35326047 48 - TSS region transcription start site region 60282
Tssr60283 6 35326073 to 35326089 16 - TSS region transcription start site region 60283
Tssr60284 6 35326123 to 35326155 32 - TSS region transcription start site region 60284
1700065J11Rik 6 35330846 to 35336825 5979 + lincRNA gene RIKEN cDNA 1700065J11 gene
Cpgi17297 6 35366430 to 35366737 307 CpG island CpG island 17297
Tssr55592 6 35411971 to 35411978 7 + TSS region transcription start site region 55592
Gm38789 6 35412804 to 35419014 6210 + lncRNA gene predicted gene, 38789
Mtpn 6 35508906 to 35539888 30982 - protein coding gene myotrophin
Tssr60285 6 35510031 to 35510038 7 - TSS region transcription start site region 60285
Tssr60286 6 35510044 to 35510055 11 - TSS region transcription start site region 60286
Tssr60287 6 35510056 to 35510068 12 - TSS region transcription start site region 60287
Tssr60288 6 35510069 to 35510101 32 - TSS region transcription start site region 60288
Tssr60289 6 35510231 to 35510240 9 - TSS region transcription start site region 60289
Tssr60290 6 35510269 to 35510281 12 - TSS region transcription start site region 60290
Tssr60291 6 35510286 to 35510327 41 - TSS region transcription start site region 60291
Tssr60292 6 35510333 to 35510344 11 - TSS region transcription start site region 60292
Tssr60293 6 35510353 to 35510364 11 - TSS region transcription start site region 60293
Tssr60294 6 35510377 to 35510387 10 - TSS region transcription start site region 60294
Tssr60295 6 35510397 to 35510408 11 - TSS region transcription start site region 60295
Tssr60296 6 35510548 to 35510570 22 - TSS region transcription start site region 60296
Tssr55593 6 35510565 to 35510578 13 + TSS region transcription start site region 55593
Tssr60297 6 35510594 to 35510615 21 - TSS region transcription start site region 60297
Tssr60298 6 35510659 to 35510729 70 - TSS region transcription start site region 60298
Tssr60299 6 35510750 to 35510764 14 - TSS region transcription start site region 60299
Tssr60300 6 35510765 to 35510789 24 - TSS region transcription start site region 60300
Tssr60301 6 35511115 to 35511148 33 - TSS region transcription start site region 60301
Tssr60302 6 35511354 to 35511381 27 - TSS region transcription start site region 60302
Tssr60303 6 35511481 to 35511492 11 - TSS region transcription start site region 60303
Tssr60304 6 35511497 to 35511509 12 - TSS region transcription start site region 60304
Tssr60305 6 35511513 to 35511534 21 - TSS region transcription start site region 60305
Tssr60306 6 35511594 to 35511618 24 - TSS region transcription start site region 60306
Tssr60307 6 35511703 to 35511724 21 - TSS region transcription start site region 60307
Tssr60308 6 35512005 to 35512041 36 - TSS region transcription start site region 60308
Tssr60309 6 35512059 to 35512072 13 - TSS region transcription start site region 60309
Tssr60310 6 35512160 to 35512224 64 - TSS region transcription start site region 60310
Tssr60311 6 35520968 to 35520975 7 - TSS region transcription start site region 60311
Gm23053 6 35524543 to 35524638 95 - miRNA gene predicted gene, 23053
Tssr60312 6 35538241 to 35538283 42 - TSS region transcription start site region 60312
Cpgi17298 6 35539126 to 35540064 938 CpG island CpG island 17298
Tssr60313 6 35539707 to 35539718 11 - TSS region transcription start site region 60313
Tssr60314 6 35539747 to 35539760 13 - TSS region transcription start site region 60314
Tssr60315 6 35539765 to 35539823 58 - TSS region transcription start site region 60315
D6Mit79 6 35558145 to 35558264 119 DNA segment DNA segment, Chr 6, Massachusetts Institute of Technology 79
Gm42931 6 35611089 to 35615669 4580 - lincRNA gene predicted gene 42931
Cpgi17299 6 35816777 to 35816973 196 CpG island CpG island 17299
Tssr1813 6 35882529 to 35882536 7 + TSS region transcription start site region 1813
9030409K20Rik 6 35883281 to 35885441 2160 unclassified gene RIKEN cDNA 9030409K20 gene
Gm43442 6 35926711 to 35927124 413 + pseudogene predicted gene 43442
Gm38790 6 35965879 to 35999695 33816 - lncRNA gene predicted gene, 38790
Gm23273 6 35975330 to 35975464 134 + snoRNA gene predicted gene, 23273
Tssr60316 6 35989016 to 35989027 11 - TSS region transcription start site region 60316
Tssr60317 6 35994652 to 35994655 3 - TSS region transcription start site region 60317
Tssr55594 6 35996994 to 35997007 13 + TSS region transcription start site region 55594
Tssr55595 6 35997011 to 35997034 23 + TSS region transcription start site region 55595
Tssr55596 6 35997080 to 35997091 11 + TSS region transcription start site region 55596
Tssr60318 6 35998666 to 35998674 8 - TSS region transcription start site region 60318
Tssr60319 6 36179774 to 36179804 30 - TSS region transcription start site region 60319
Gm43443 6 36186707 to 36189099 2392 - unclassified gene predicted gene 43443
Tssr1814 6 36195415 to 36195419 4 - TSS region transcription start site region 1814
9330158H04Rik 6 36333138 to 36388234 55096 - lincRNA gene RIKEN cDNA 9330158H04 gene
Tssr55597 6 36365004 to 36365005 1 + TSS region transcription start site region 55597
Tssr60320 6 36387845 to 36387861 16 - TSS region transcription start site region 60320
Cpgi17300 6 36387867 to 36388821 954 CpG island CpG island 17300
Tssr55598 6 36387967 to 36388027 60 + TSS region transcription start site region 55598
Tssr55599 6 36388039 to 36388053 14 + TSS region transcription start site region 55599
Tssr55600 6 36388055 to 36388070 15 + TSS region transcription start site region 55600
Chrm2 6 36388084 to 36528414 140330 + protein coding gene cholinergic receptor, muscarinic 2, cardiac
Tssr55601 6 36388186 to 36388207 21 + TSS region transcription start site region 55601
Tssr55602 6 36388209 to 36388221 12 + TSS region transcription start site region 55602
Tssr55603 6 36388581 to 36388616 35 + TSS region transcription start site region 55603
Tssr60321 6 36388915 to 36388918 3 - TSS region transcription start site region 60321
Tssr55604 6 36389154 to 36389173 19 + TSS region transcription start site region 55604
Tssr55605 6 36389321 to 36389334 13 + TSS region transcription start site region 55605
Tssr55606 6 36389389 to 36389407 18 + TSS region transcription start site region 55606
Tssr55607 6 36389408 to 36389419 11 + TSS region transcription start site region 55607
Tssr55608 6 36389431 to 36389440 9 + TSS region transcription start site region 55608