Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 6:34626368-34866393

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79 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cald1 6 34598496 to 34775469 176973 + protein coding gene caldesmon 1
Gm13861 6 34651354 to 34653894 2540 - lincRNA gene predicted gene 13861
Tssr55518 6 34662167 to 34662191 24 + TSS region transcription start site region 55518
Tssr55519 6 34682936 to 34682975 39 + TSS region transcription start site region 55519
Tssr55520 6 34685094 to 34685105 11 + TSS region transcription start site region 55520
Tssr55521 6 34685108 to 34685130 22 + TSS region transcription start site region 55521
Tssr55522 6 34709438 to 34709446 8 + TSS region transcription start site region 55522
Tssr55523 6 34709473 to 34709497 24 + TSS region transcription start site region 55523
Tssr55524 6 34709517 to 34709542 25 + TSS region transcription start site region 55524
Tssr55525 6 34709575 to 34709586 11 + TSS region transcription start site region 55525
Tssr55526 6 34709610 to 34709635 25 + TSS region transcription start site region 55526
Gm38787 6 34712295 to 34713160 865 - lncRNA gene predicted gene, 38787
Tssr60240 6 34713162 to 34713174 12 - TSS region transcription start site region 60240
Npn2 6 34726672 to 34726906 234 - antisense lncRNA gene neoplastic progression 2
Gm14547 6 34727221 to 34735389 8168 - antisense lncRNA gene predicted gene 14547
Cia6b 6 34734663 to 38969603 4234940 QTL collagen induced arthritis QTL 6b
Fglu 6 34734663 to 34734784 121 QTL fasting glucose
D6Mit268 6 34734663 to 34734784 121 DNA segment DNA segment, Chr 6, Massachusetts Institute of Technology 268
Pcd4ts1 6 34734663 to 34734784 121 QTL p-glycoprotein positive CD4 T cell subset 1
Spqq2 6 34734663 to 34734784 121 QTL sperm quality QTL 2
Tssr60241 6 34741819 to 34741840 21 - TSS region transcription start site region 60241
Tssr55527 6 34745635 to 34745640 5 + TSS region transcription start site region 55527
Tssr55528 6 34745660 to 34745690 30 + TSS region transcription start site region 55528
Tssr55529 6 34745691 to 34745728 37 + TSS region transcription start site region 55529
Tssr55530 6 34745734 to 34745749 15 + TSS region transcription start site region 55530
Tssr55531 6 34745753 to 34745771 18 + TSS region transcription start site region 55531
Tssr55532 6 34745779 to 34745789 10 + TSS region transcription start site region 55532
Tssr55533 6 34745794 to 34745808 14 + TSS region transcription start site region 55533
Tssr55534 6 34745841 to 34745854 13 + TSS region transcription start site region 55534
Tssr55535 6 34745858 to 34745867 9 + TSS region transcription start site region 55535
Tssr55536 6 34745873 to 34745892 19 + TSS region transcription start site region 55536
Tssr55537 6 34745894 to 34745910 16 + TSS region transcription start site region 55537
Tssr60242 6 34745935 to 34746010 75 - TSS region transcription start site region 60242
Tssr55538 6 34745970 to 34745980 10 + TSS region transcription start site region 55538
Tssr55539 6 34745991 to 34746004 13 + TSS region transcription start site region 55539
Tssr60243 6 34746016 to 34746046 30 - TSS region transcription start site region 60243
Tssr55540 6 34746029 to 34746042 13 + TSS region transcription start site region 55540
Tssr55541 6 34746082 to 34746096 14 + TSS region transcription start site region 55541
Tssr60244 6 34746138 to 34746159 21 - TSS region transcription start site region 60244
Tssr55542 6 34746216 to 34746227 11 + TSS region transcription start site region 55542
Tssr60245 6 34746219 to 34746246 27 - TSS region transcription start site region 60245
Tssr55543 6 34746272 to 34746291 19 + TSS region transcription start site region 55543
Tssr60246 6 34746290 to 34746307 17 - TSS region transcription start site region 60246
Tssr55544 6 34746368 to 34746393 25 + TSS region transcription start site region 55544
Tssr60247 6 34746382 to 34746393 11 - TSS region transcription start site region 60247
Tssr60248 6 34746398 to 34746444 46 - TSS region transcription start site region 60248
Tssr55545 6 34746425 to 34746437 12 + TSS region transcription start site region 55545
Tssr60249 6 34746460 to 34746574 114 - TSS region transcription start site region 60249
Tssr55546 6 34746461 to 34746473 12 + TSS region transcription start site region 55546
Tssr55547 6 34746544 to 34746557 13 + TSS region transcription start site region 55547
Tssr55548 6 34751574 to 34751578 4 + TSS region transcription start site region 55548
Tssr55549 6 34753587 to 34753591 4 + TSS region transcription start site region 55549
Tssr55550 6 34755653 to 34755683 30 + TSS region transcription start site region 55550
Tssr55551 6 34755689 to 34755726 37 + TSS region transcription start site region 55551
Cpgi17284 6 34755709 to 34755921 212 CpG island CpG island 17284
Tssr60250 6 34755815 to 34755885 70 - TSS region transcription start site region 60250
Tssr55552 6 34768780 to 34768783 3 + TSS region transcription start site region 55552
Tssr55553 6 34773894 to 34773932 38 + TSS region transcription start site region 55553
Tssr55554 6 34774034 to 34774040 6 + TSS region transcription start site region 55554
Tssr55555 6 34774239 to 34774266 27 + TSS region transcription start site region 55555
Cpgi17285 6 34780228 to 34781133 905 CpG island CpG island 17285
Tssr55556 6 34780412 to 34780467 55 + TSS region transcription start site region 55556
Agbl3 6 34780432 to 34859459 79027 + protein coding gene ATP/GTP binding protein-like 3
Tssr55557 6 34780836 to 34780905 69 + TSS region transcription start site region 55557
Tssr55558 6 34780940 to 34780988 48 + TSS region transcription start site region 55558
Gm13864 6 34786679 to 34787463 784 + pseudogene predicted gene 13864
Gm13862 6 34810631 to 34810827 196 - pseudogene predicted gene 13862
Gm13863 6 34820204 to 34820899 695 - pseudogene predicted gene 13863
Tssr60251 6 34824449 to 34824465 16 - TSS region transcription start site region 60251
Gm46957 6 34841335 to 34849543 8208 - lncRNA gene predicted gene, 46957
Gm43748 6 34859705 to 34860937 1232 + unclassified gene predicted gene 43748
Tssr60252 6 34862572 to 34862613 41 - TSS region transcription start site region 60252
Tssr55559 6 34863101 to 34863112 11 + TSS region transcription start site region 55559
Tssr55560 6 34863114 to 34863120 6 + TSS region transcription start site region 55560
Tssr55561 6 34863130 to 34863183 53 + TSS region transcription start site region 55561
Tmem140 6 34863146 to 34874946 11800 + protein coding gene transmembrane protein 140
Tssr55562 6 34863218 to 34863241 23 + TSS region transcription start site region 55562
Tssr55563 6 34865089 to 34865095 6 + TSS region transcription start site region 55563
Tssr55564 6 34866349 to 34866386 37 + TSS region transcription start site region 55564