Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 6:3379486-3609526

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25 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Samd9l 6 3372257 to 3399571 27314 - protein coding gene sterile alpha motif domain containing 9-like
Tssr59688 6 3382000 to 3382014 14 - TSS region transcription start site region 59688
Tssr59689 6 3399301 to 3399315 14 - TSS region transcription start site region 59689
Tssr59690 6 3399451 to 3399464 13 - TSS region transcription start site region 59690
Tssr59691 6 3399545 to 3399574 29 - TSS region transcription start site region 59691
Hepacam2 6 3457096 to 3498298 41202 - protein coding gene HEPACAM family member 2
Tssr59692 6 3487371 to 3487419 48 - TSS region transcription start site region 59692
Tssr59693 6 3487479 to 3487484 5 - TSS region transcription start site region 59693
Tssr59694 6 3494486 to 3494526 40 - TSS region transcription start site region 59694
Tssr59695 6 3494527 to 3494542 15 - TSS region transcription start site region 59695
Tssr59696 6 3494549 to 3494563 14 - TSS region transcription start site region 59696
Tssr59697 6 3494587 to 3494598 11 - TSS region transcription start site region 59697
Tssr1765 6 3494605 to 3494612 7 - TSS region transcription start site region 1765
Cpgi17120 6 3498259 to 3498431 172 CpG island CpG island 17120
Tssr59698 6 3498301 to 3498312 11 - TSS region transcription start site region 59698
Vps50 6 3498393 to 3603531 105138 + protein coding gene VPS50 EARP/GARPII complex subunit
Tssr54697 6 3498399 to 3498439 40 + TSS region transcription start site region 54697
Tssr1766 6 3504241 to 3504245 4 + TSS region transcription start site region 1766
Tssr54698 6 3523934 to 3523942 8 + TSS region transcription start site region 54698
Tssr54699 6 3526668 to 3526679 11 + TSS region transcription start site region 54699
D6Mit231 6 3528851 to 3528953 102 DNA segment DNA segment, Chr 6, Massachusetts Institute of Technology 231
Tssr1767 6 3570559 to 3570564 5 - TSS region transcription start site region 1767
Tssr59699 6 3570570 to 3570583 13 - TSS region transcription start site region 59699
Tssr54700 6 3574274 to 3574278 4 + TSS region transcription start site region 54700
Gm43294 6 3583814 to 3586303 2489 + unclassified gene predicted gene 43294