Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 6:31226401-32120698

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63 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
2210408F21Rik 6 31220351 to 31337395 117044 + lncRNA gene RIKEN cDNA 2210408F21 gene
Tssr55462 6 31237263 to 31237283 20 + TSS region transcription start site region 55462
Gm38782 6 31240578 to 31243962 3384 - lncRNA gene predicted gene, 38782
Cpgi17269 6 31266674 to 31266941 267 CpG island CpG island 17269
Cpgi17270 6 31285007 to 31285442 435 CpG island CpG island 17270
Gm43800 6 31288963 to 31291693 2730 + unclassified gene predicted gene 43800
Tssr55463 6 31288988 to 31289000 12 + TSS region transcription start site region 55463
D6Mit172 6 31309671 to 31309862 191 DNA segment DNA segment, Chr 6, Massachusetts Institute of Technology 172
D6Mit172.2 6 31309829 to 31309941 112 DNA segment DNA segment, Chr 6, Massachusetts Institute of Technology 172.2
Tssr55464 6 31314111 to 31314139 28 + TSS region transcription start site region 55464
Tssr60188 6 31318117 to 31318151 34 - TSS region transcription start site region 60188
Tssr55465 6 31327263 to 31327266 3 + TSS region transcription start site region 55465
9530034D02Rik 6 31330626 to 31331730 1104 unclassified gene RIKEN cDNA 9530034D02 gene
Gm14532 6 31356743 to 31372369 15626 + lincRNA gene predicted gene 14532
Mkln1os 6 31366885 to 31398773 31888 - lincRNA gene muskelin 1, intracellular mediator containing kelch motifs, opposite strand
Gm13844 6 31372895 to 31383877 10982 + lincRNA gene predicted gene 13844
Cpgi17271 6 31398651 to 31399855 1204 CpG island CpG island 17271
Tssr60189 6 31398734 to 31398766 32 - TSS region transcription start site region 60189
Tssr55466 6 31398817 to 31398856 39 + TSS region transcription start site region 55466
Mkln1 6 31398828 to 31511894 113066 + protein coding gene muskelin 1, intracellular mediator containing kelch motifs
Tssr60190 6 31399400 to 31399420 20 - TSS region transcription start site region 60190
Tssr60191 6 31480117 to 31480139 22 - TSS region transcription start site region 60191
Tssr60192 6 31480163 to 31480180 17 - TSS region transcription start site region 60192
Podxl 6 31519493 to 31563937 44444 - protein coding gene podocalyxin-like
Tssr60193 6 31528632 to 31528639 7 - TSS region transcription start site region 60193
Tssr60194 6 31528641 to 31528666 25 - TSS region transcription start site region 60194
Tssr60195 6 31528668 to 31528687 19 - TSS region transcription start site region 60195
Tssr60196 6 31528709 to 31528731 22 - TSS region transcription start site region 60196
Tssr55467 6 31532186 to 31532200 14 + TSS region transcription start site region 55467
Tssr60197 6 31562066 to 31562069 3 - TSS region transcription start site region 60197
Cpgi17272 6 31563034 to 31564465 1431 CpG island CpG island 17272
Tssr60198 6 31563840 to 31563854 14 - TSS region transcription start site region 60198
Tssr60199 6 31563855 to 31563880 25 - TSS region transcription start site region 60199
Tssr60200 6 31563882 to 31563883 1 - TSS region transcription start site region 60200
Tssr60201 6 31563888 to 31563910 22 - TSS region transcription start site region 60201
Tssr60202 6 31563926 to 31563935 9 - TSS region transcription start site region 60202
Tssr60203 6 31563978 to 31563989 11 - TSS region transcription start site region 60203
Gm6117 6 31574732 to 31575892 1160 + lincRNA gene predicted gene 6117
Tssr55468 6 31574981 to 31574991 10 + TSS region transcription start site region 55468
Gm31486 6 31605142 to 31635773 30631 + lncRNA gene predicted gene, 31486
Gm43154 6 31605190 to 31798053 192863 + lincRNA gene predicted gene 43154
Tssr55469 6 31619960 to 31619984 24 + TSS region transcription start site region 55469
Gm13846 6 31650979 to 31743088 92109 + lncRNA gene predicted gene 13846
Gm13848 6 31658173 to 31666131 7958 - lincRNA gene predicted gene 13848
Gm13847 6 31666401 to 31680698 14297 + lncRNA gene predicted gene 13847
Tssr55470 6 31679332 to 31679339 7 + TSS region transcription start site region 55470
Gm43293 6 31702245 to 31706990 4745 - lincRNA gene predicted gene 43293
Obrq2a 6 31717406 to 34870960 3153554 QTL obesity resistance QTL 2a
D6Mit237 6 31748076 to 31748210 134 DNA segment DNA segment, Chr 6, Massachusetts Institute of Technology 237
D6Mit237.2 6 31748205 to 31748401 196 DNA segment DNA segment, Chr 6, Massachusetts Institute of Technology 237.2
Gm13849 6 31786675 to 31922270 135595 + lincRNA gene predicted gene 13849
Cpgi17273 6 31938289 to 31938602 313 CpG island CpG island 17273
Tssr1808 6 31955242 to 31955255 13 + TSS region transcription start site region 1808
D6Mit81 6 32016314 to 32016508 194 DNA segment DNA segment, Chr 6, Massachusetts Institute of Technology 81
Gm31894 6 32017998 to 32040930 22932 + lncRNA gene predicted gene, 31894
D6Mit51 6 32049218 to 32049334 116 DNA segment DNA segment, Chr 6, Massachusetts Institute of Technology 51
Tssr55471 6 32050266 to 32050278 12 + TSS region transcription start site region 55471
Tssr55472 6 32050281 to 32050307 26 + TSS region transcription start site region 55472
1700012A03Rik 6 32050285 to 32058915 8630 + protein coding gene RIKEN cDNA 1700012A03 gene
D6Mit341 6 32101005 to 32101125 120 DNA segment DNA Segment, Chr 6, Massachusetts Institute of Technology 341
Tssr55473 6 32112113 to 32112130 17 + TSS region transcription start site region 55473
Gm13850 6 32112143 to 32113226 1083 + lincRNA gene predicted gene 13850
D6Mit47 6 32114315 to 32114505 190 DNA segment DNA segment, Chr 6, Massachusetts Institute of Technology 47