Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 6:30806021-31108990

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39 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Copg2 6 30747554 to 30896794 149240 - protein coding gene coatomer protein complex, subunit gamma 2
Copg2os2 6 30802886 to 30809198 6312 unclassified non-coding RNA gene coatomer protein complex, subunit gamma 2, opposite strand 2
Tssr55441 6 30806217 to 30806237 20 + TSS region transcription start site region 55441
Tssr55442 6 30806310 to 30806328 18 + TSS region transcription start site region 55442
Tssr55443 6 30806395 to 30806409 14 + TSS region transcription start site region 55443
Tssr55444 6 30806493 to 30806516 23 + TSS region transcription start site region 55444
Tssr55445 6 30806543 to 30806583 40 + TSS region transcription start site region 55445
Tssr60141 6 30806613 to 30806617 4 - TSS region transcription start site region 60141
Tssr60142 6 30806791 to 30806804 13 - TSS region transcription start site region 60142
Gm38781 6 30885666 to 30894500 8834 + lncRNA gene predicted gene, 38781
Cpgi17262 6 30896035 to 30897084 1049 CpG island CpG island 17262
Tssr60143 6 30896735 to 30896785 50 - TSS region transcription start site region 60143
Tsga13 6 30896981 to 30915573 18592 - protein coding gene testis specific gene A13
Tssr55446 6 30903556 to 30903565 9 + TSS region transcription start site region 55446
4930412F09Rik 6 30903562 to 30912860 9298 + lincRNA gene RIKEN cDNA 4930412F09 gene
Tssr1806 6 30903574 to 30903583 9 + TSS region transcription start site region 1806
Tssr60144 6 30915552 to 30915590 38 - TSS region transcription start site region 60144
Cpgi17263 6 30921329 to 30921644 315 CpG island CpG island 17263
Klf14 6 30956021 to 30958990 2969 - protein coding gene Kruppel-like factor 14
Cpgi17264 6 30957636 to 30959370 1734 CpG island CpG island 17264
Tssr60145 6 30958793 to 30958815 22 - TSS region transcription start site region 60145
Gm40359 6 31010065 to 31015564 5499 - lncRNA gene predicted gene, 40359
Tssr55447 6 31023557 to 31023559 2 + TSS region transcription start site region 55447
Cpgi17265 6 31037801 to 31038163 362 CpG island CpG island 17265
Tssr60146 6 31052518 to 31052522 4 - TSS region transcription start site region 60146
Mir29a 6 31062660 to 31062747 87 - miRNA gene microRNA 29a
Mirc33 6 31062660 to 31063093 433 complex/cluster/region microRNA cluster 33, including Mir29a through Mir29b-1
Mir29b-1 6 31063023 to 31063093 70 - miRNA gene microRNA 29b-1
Gm27019 6 31063092 to 31063495 403 - lincRNA gene predicted gene, 27019
Tssr60147 6 31069877 to 31069880 3 - TSS region transcription start site region 60147
Tssr60148 6 31087625 to 31087645 20 - TSS region transcription start site region 60148
Tssr60149 6 31088213 to 31088222 9 - TSS region transcription start site region 60149
Tssr60150 6 31088349 to 31088357 8 - TSS region transcription start site region 60150
Tssr60151 6 31088438 to 31088445 7 - TSS region transcription start site region 60151
Tssr60152 6 31088464 to 31088481 17 - TSS region transcription start site region 60152
Tssr60153 6 31088542 to 31088552 10 - TSS region transcription start site region 60153
Lncpint 6 31093563 to 31218474 124911 - lincRNA gene long non-protein coding RNA, Trp53 induced transcript
Gm13833 6 31102846 to 31104646 1800 + lincRNA gene predicted gene 13833
5330406M23Rik 6 31108827 to 31110920 2093 - unclassified gene RIKEN cDNA 5330406M23 gene