Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 6:30275980-30645989

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95 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Ube2h 6 30211289 to 30304539 93250 - protein coding gene ubiquitin-conjugating enzyme E2H
Tssr60114 6 30302614 to 30302619 5 - TSS region transcription start site region 60114
Cpgi17253 6 30303780 to 30304825 1045 CpG island CpG island 17253
Tssr60115 6 30304513 to 30304570 57 - TSS region transcription start site region 60115
1700095J07Rik 6 30304605 to 30331779 27174 + lincRNA gene RIKEN cDNA 1700095J07 gene
Tssr1802 6 30304610 to 30304618 8 + TSS region transcription start site region 1802
Gm25625 6 30347371 to 30347466 95 - rRNA gene predicted gene, 25625
Tssr55336 6 30353024 to 30353030 6 + TSS region transcription start site region 55336
Tssr55337 6 30359472 to 30359475 3 + TSS region transcription start site region 55337
Zc3hc1 6 30366380 to 30391028 24648 - protein coding gene zinc finger, C3HC type 1
n-R5s161 6 30379101 to 30379214 113 + rRNA gene nuclear encoded rRNA 5S 161
Cpgi17254 6 30390668 to 30391120 452 CpG island CpG island 17254
Tssr60116 6 30390997 to 30391029 32 - TSS region transcription start site region 60116
Cpgi17255 6 30401522 to 30402434 912 CpG island CpG island 17255
Tssr55338 6 30401866 to 30401965 99 + TSS region transcription start site region 55338
Klhdc10 6 30401868 to 30455179 53311 + protein coding gene kelch domain containing 10
Cpgi17256 6 30459739 to 30460259 520 CpG island CpG island 17256
Tssr55339 6 30460980 to 30460989 9 + TSS region transcription start site region 55339
1700012C14Rik 6 30460985 to 30463313 2328 + lincRNA gene RIKEN cDNA 1700012C14 gene
Tssr55340 6 30460991 to 30461000 9 + TSS region transcription start site region 55340
Tssr60117 6 30477548 to 30477552 4 - TSS region transcription start site region 60117
Tmem209 6 30481022 to 30509783 28761 - protein coding gene transmembrane protein 209
D6Ertd15e 6 30483990 to 30484210 220 DNA segment DNA segment, Chr 6, ERATO Doi 15, expressed
Tssr60118 6 30502555 to 30502558 3 - TSS region transcription start site region 60118
Tssr60119 6 30505959 to 30505980 21 - TSS region transcription start site region 60119
Cpgi17257 6 30509566 to 30509932 366 CpG island CpG island 17257
Tssr60120 6 30509706 to 30509733 27 - TSS region transcription start site region 60120
Tssr60121 6 30509738 to 30509757 19 - TSS region transcription start site region 60121
Tssr55341 6 30509827 to 30509848 21 + TSS region transcription start site region 55341
Tssr55342 6 30509849 to 30509889 40 + TSS region transcription start site region 55342
Ssmem1 6 30509849 to 30520254 10405 + protein coding gene serine-rich single-pass membrane protein 1
Tssr55343 6 30512283 to 30512288 5 + TSS region transcription start site region 55343
Tssr55344 6 30512294 to 30512319 25 + TSS region transcription start site region 55344
Tssr55345 6 30512322 to 30512333 11 + TSS region transcription start site region 55345
Tssr55346 6 30512340 to 30512345 5 + TSS region transcription start site region 55346
Tssr55347 6 30541635 to 30541650 15 + TSS region transcription start site region 55347
Cpa2 6 30541642 to 30564476 22834 + protein coding gene carboxypeptidase A2, pancreatic
Tssr55348 6 30544022 to 30544030 8 + TSS region transcription start site region 55348
Tssr55349 6 30544885 to 30544910 25 + TSS region transcription start site region 55349
Tssr55350 6 30544986 to 30544997 11 + TSS region transcription start site region 55350
Gm46955 6 30547637 to 30550785 3148 - lncRNA gene predicted gene, 46955
Tssr55351 6 30551460 to 30551464 4 + TSS region transcription start site region 55351
Tssr55352 6 30554596 to 30554601 5 + TSS region transcription start site region 55352
Tssr55353 6 30560507 to 30560512 5 + TSS region transcription start site region 55353
Tssr55354 6 30564398 to 30564416 18 + TSS region transcription start site region 55354
Tssr55355 6 30568367 to 30568382 15 + TSS region transcription start site region 55355
Cpa4 6 30568376 to 30592418 24042 + protein coding gene carboxypeptidase A4
Gm13781 6 30573153 to 30576035 2882 - antisense lncRNA gene predicted gene 13781
Tssr55356 6 30580875 to 30580886 11 + TSS region transcription start site region 55356
Gm31453 6 30594135 to 30610933 16798 - lncRNA gene predicted gene, 31453
Tssr60122 6 30610902 to 30610912 10 - TSS region transcription start site region 60122
Tssr60123 6 30610934 to 30610941 7 - TSS region transcription start site region 60123
Tssr55357 6 30610976 to 30610983 7 + TSS region transcription start site region 55357
Tssr55358 6 30610984 to 30611026 42 + TSS region transcription start site region 55358
Cpa5 6 30611010 to 30631740 20730 + protein coding gene carboxypeptidase A5
Tssr55359 6 30611029 to 30611040 11 + TSS region transcription start site region 55359
Cpa1 6 30639218 to 30645361 6143 + protein coding gene carboxypeptidase A1, pancreatic
Tssr55360 6 30639434 to 30639452 18 + TSS region transcription start site region 55360
Tssr1803 6 30639975 to 30640011 36 + TSS region transcription start site region 1803
Tssr55361 6 30640439 to 30640450 11 + TSS region transcription start site region 55361
Tssr55362 6 30640452 to 30640463 11 + TSS region transcription start site region 55362
Tssr55363 6 30640514 to 30640547 33 + TSS region transcription start site region 55363
Tssr55364 6 30640553 to 30640570 17 + TSS region transcription start site region 55364
Tssr55365 6 30640581 to 30640667 86 + TSS region transcription start site region 55365
Tssr60124 6 30640653 to 30640700 47 - TSS region transcription start site region 60124
Tssr55366 6 30640672 to 30640715 43 + TSS region transcription start site region 55366
Tssr60125 6 30640716 to 30640741 25 - TSS region transcription start site region 60125
Tssr55367 6 30640889 to 30640946 57 + TSS region transcription start site region 55367
Tssr60126 6 30640915 to 30640951 36 - TSS region transcription start site region 60126
Tssr55368 6 30641503 to 30641513 10 + TSS region transcription start site region 55368
Tssr55369 6 30641537 to 30641561 24 + TSS region transcription start site region 55369
Tssr55370 6 30641755 to 30641792 37 + TSS region transcription start site region 55370
Tssr60127 6 30641783 to 30641803 20 - TSS region transcription start site region 60127
Tssr55371 6 30641793 to 30641841 48 + TSS region transcription start site region 55371
Tssr60128 6 30641851 to 30641877 26 - TSS region transcription start site region 60128
Tssr55372 6 30642293 to 30642298 5 + TSS region transcription start site region 55372
Tssr55373 6 30642305 to 30642327 22 + TSS region transcription start site region 55373
Tssr60129 6 30642322 to 30642359 37 - TSS region transcription start site region 60129
Tssr55374 6 30642329 to 30642342 13 + TSS region transcription start site region 55374
Tssr55375 6 30642347 to 30642359 12 + TSS region transcription start site region 55375
Tssr55376 6 30642855 to 30642881 26 + TSS region transcription start site region 55376
Tssr55377 6 30642885 to 30642888 3 + TSS region transcription start site region 55377
Tssr55378 6 30642899 to 30642912 13 + TSS region transcription start site region 55378
Tssr55379 6 30642924 to 30642938 14 + TSS region transcription start site region 55379
Tssr55380 6 30642940 to 30642949 9 + TSS region transcription start site region 55380
Tssr55381 6 30642964 to 30643018 54 + TSS region transcription start site region 55381
Tssr55382 6 30643020 to 30643027 7 + TSS region transcription start site region 55382
Tssr60130 6 30643024 to 30643057 33 - TSS region transcription start site region 60130
Tssr55383 6 30643536 to 30643582 46 + TSS region transcription start site region 55383
Tssr55384 6 30643588 to 30643599 11 + TSS region transcription start site region 55384
Tssr55385 6 30645095 to 30645167 72 + TSS region transcription start site region 55385
Tssr60131 6 30645230 to 30645247 17 - TSS region transcription start site region 60131
Tssr55386 6 30645247 to 30645276 29 + TSS region transcription start site region 55386
Tssr60132 6 30645258 to 30645289 31 - TSS region transcription start site region 60132
Tssr55387 6 30645291 to 30645323 32 + TSS region transcription start site region 55387