Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 6:30265997-30516029

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35 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Ube2h 6 30211289 to 30304539 93250 - protein coding gene ubiquitin-conjugating enzyme E2H
Tssr60114 6 30302614 to 30302619 5 - TSS region transcription start site region 60114
Cpgi17253 6 30303780 to 30304825 1045 CpG island CpG island 17253
Tssr60115 6 30304513 to 30304570 57 - TSS region transcription start site region 60115
1700095J07Rik 6 30304605 to 30331779 27174 + lincRNA gene RIKEN cDNA 1700095J07 gene
Tssr1802 6 30304610 to 30304618 8 + TSS region transcription start site region 1802
Gm25625 6 30347371 to 30347466 95 - rRNA gene predicted gene, 25625
Tssr55336 6 30353024 to 30353030 6 + TSS region transcription start site region 55336
Tssr55337 6 30359472 to 30359475 3 + TSS region transcription start site region 55337
Zc3hc1 6 30366380 to 30391028 24648 - protein coding gene zinc finger, C3HC type 1
n-R5s161 6 30379101 to 30379214 113 + rRNA gene nuclear encoded rRNA 5S 161
Cpgi17254 6 30390668 to 30391120 452 CpG island CpG island 17254
Tssr60116 6 30390997 to 30391029 32 - TSS region transcription start site region 60116
Cpgi17255 6 30401522 to 30402434 912 CpG island CpG island 17255
Tssr55338 6 30401866 to 30401965 99 + TSS region transcription start site region 55338
Klhdc10 6 30401868 to 30455179 53311 + protein coding gene kelch domain containing 10
Cpgi17256 6 30459739 to 30460259 520 CpG island CpG island 17256
Tssr55339 6 30460980 to 30460989 9 + TSS region transcription start site region 55339
1700012C14Rik 6 30460985 to 30463313 2328 + lincRNA gene RIKEN cDNA 1700012C14 gene
Tssr55340 6 30460991 to 30461000 9 + TSS region transcription start site region 55340
Tssr60117 6 30477548 to 30477552 4 - TSS region transcription start site region 60117
Tmem209 6 30481022 to 30509783 28761 - protein coding gene transmembrane protein 209
D6Ertd15e 6 30483990 to 30484210 220 DNA segment DNA segment, Chr 6, ERATO Doi 15, expressed
Tssr60118 6 30502555 to 30502558 3 - TSS region transcription start site region 60118
Tssr60119 6 30505959 to 30505980 21 - TSS region transcription start site region 60119
Cpgi17257 6 30509566 to 30509932 366 CpG island CpG island 17257
Tssr60120 6 30509706 to 30509733 27 - TSS region transcription start site region 60120
Tssr60121 6 30509738 to 30509757 19 - TSS region transcription start site region 60121
Tssr55341 6 30509827 to 30509848 21 + TSS region transcription start site region 55341
Tssr55342 6 30509849 to 30509889 40 + TSS region transcription start site region 55342
Ssmem1 6 30509849 to 30520254 10405 + protein coding gene serine-rich single-pass membrane protein 1
Tssr55343 6 30512283 to 30512288 5 + TSS region transcription start site region 55343
Tssr55344 6 30512294 to 30512319 25 + TSS region transcription start site region 55344
Tssr55345 6 30512322 to 30512333 11 + TSS region transcription start site region 55345
Tssr55346 6 30512340 to 30512345 5 + TSS region transcription start site region 55346