MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 6:30198780-30409825

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19 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Cpgi17252	6	30205624 to 30206056	432		CpG island	CpG island 17252
Ube2h	6	30211289 to 30304539	93250	-	protein coding gene	ubiquitin-conjugating enzyme E2H
Tssr60112	6	30245410 to 30245414	4	-	TSS region	transcription start site region 60112
Tssr60113	6	30254050 to 30254060	10	-	TSS region	transcription start site region 60113
Tssr60114	6	30302614 to 30302619	5	-	TSS region	transcription start site region 60114
Cpgi17253	6	30303780 to 30304825	1045		CpG island	CpG island 17253
Tssr60115	6	30304513 to 30304570	57	-	TSS region	transcription start site region 60115
1700095J07Rik	6	30304605 to 30331779	27174	+	lincRNA gene	RIKEN cDNA 1700095J07 gene
Tssr1802	6	30304610 to 30304618	8	+	TSS region	transcription start site region 1802
Gm25625	6	30347371 to 30347466	95	-	rRNA gene	predicted gene, 25625
Tssr55336	6	30353024 to 30353030	6	+	TSS region	transcription start site region 55336
Tssr55337	6	30359472 to 30359475	3	+	TSS region	transcription start site region 55337
Zc3hc1	6	30366380 to 30391028	24648	-	protein coding gene	zinc finger, C3HC type 1
n-R5s161	6	30379101 to 30379214	113	+	rRNA gene	nuclear encoded rRNA 5S 161
Cpgi17254	6	30390668 to 30391120	452		CpG island	CpG island 17254
Tssr60116	6	30390997 to 30391029	32	-	TSS region	transcription start site region 60116
Cpgi17255	6	30401522 to 30402434	912		CpG island	CpG island 17255
Tssr55338	6	30401866 to 30401965	99	+	TSS region	transcription start site region 55338
Klhdc10	6	30401868 to 30455179	53311	+	protein coding gene	kelch domain containing 10