Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 6:29927532-30169084

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32 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Strip2 6 29917012 to 29959681 42669 + protein coding gene striatin interacting protein 2
D6Mit205 6 29938837 to 29938981 144 DNA segment DNA segment, Chr 6, Massachusetts Institute of Technology 205
Tssr55316 6 29957549 to 29957551 2 + TSS region transcription start site region 55316
Gm13724 6 29960950 to 29961762 812 + pseudogene predicted gene 13724
Gm24536 6 29963555 to 29963661 106 + snRNA gene predicted gene, 24536
Gm13725 6 29963644 to 29963850 206 + pseudogene predicted gene 13725
Gm31103 6 29965247 to 29968561 3314 + lncRNA gene predicted gene, 31103
Cpgi17246 6 29985136 to 29985784 648 CpG island CpG island 17246
Tssr55317 6 29985296 to 29985308 12 + TSS region transcription start site region 55317
Tssr55318 6 29985317 to 29985344 27 + TSS region transcription start site region 55318
Smkr-ps 6 29985329 to 29993531 8202 + pseudogene smal lysine rich protein 1, pseudogene
Tssr55319 6 29985346 to 29985353 7 + TSS region transcription start site region 55319
Tssr55320 6 29985357 to 29985366 9 + TSS region transcription start site region 55320
Gm23049 6 29988388 to 29988489 101 + miRNA gene predicted gene, 23049
Tssr55321 6 30027196 to 30027200 4 + TSS region transcription start site region 55321
1700080G18Rik 6 30047400 to 30049144 1744 - protein coding gene RIKEN cDNA 1700080G18 gene
Cpgi17247 6 30047532 to 30049084 1552 CpG island CpG island 17247
Tssr60103 6 30047923 to 30047954 31 - TSS region transcription start site region 60103
Tssr55322 6 30047979 to 30048049 70 + TSS region transcription start site region 55322
Nrf1 6 30047988 to 30153458 105470 + protein coding gene nuclear respiratory factor 1
Tssr55323 6 30048062 to 30048078 16 + TSS region transcription start site region 55323
Tssr55324 6 30065519 to 30065522 3 + TSS region transcription start site region 55324
Tssr1801 6 30079941 to 30079946 5 + TSS region transcription start site region 1801
Tssr55325 6 30102140 to 30102149 9 + TSS region transcription start site region 55325
Tssr55326 6 30102153 to 30102160 7 + TSS region transcription start site region 55326
Tssr60104 6 30135954 to 30135957 3 - TSS region transcription start site region 60104
Gm25580 6 30143801 to 30144127 326 - unclassified non-coding RNA gene predicted gene, 25580
Tssr60105 6 30147094 to 30147108 14 - TSS region transcription start site region 60105
Tssr60106 6 30157565 to 30157569 4 - TSS region transcription start site region 60106
Mirc35hg 6 30158640 to 30174125 15485 - lncRNA gene microRNA cluster 35, host gene
Mir182 6 30165918 to 30165992 74 - miRNA gene microRNA 182
Mirc35 6 30165918 to 30169737 3819 complex/cluster/region microRNA cluster 35, including Mir182 through Mir183