MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 6:29462717-29512822

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19 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Cpgi17233	6	29467588 to 29468315	727		CpG island	CpG island 17233
Tssr55261	6	29467733 to 29467764	31	+	TSS region	transcription start site region 55261
Tssr55262	6	29467772 to 29467810	38	+	TSS region	transcription start site region 55262
Atp6v1f	6	29467783 to 29470509	2726	+	protein coding gene	ATPase, H+ transporting, lysosomal V1 subunit F
Tssr55263	6	29468076 to 29468113	37	+	TSS region	transcription start site region 55263
Atp6v1fnb	6	29471437 to 29473429	1992	+	protein coding gene	Atp6v1f neighbor
Tssr55264	6	29471457 to 29471497	40	+	TSS region	transcription start site region 55264
Tssr55265	6	29471499 to 29471518	19	+	TSS region	transcription start site region 55265
Kcp	6	29473162 to 29507952	34790	-	protein coding gene	kielin/chordin-like protein
Cpgi17234	6	29473846 to 29474475	629		CpG island	CpG island 17234
Tssr60094	6	29478397 to 29478407	10	-	TSS region	transcription start site region 60094
D6Rck39	6	29478879 to 29479010	131		DNA segment	DNA segment, Chr 6, Rockefeller University 39
Cpgi17235	6	29484945 to 29485238	293		CpG island	CpG island 17235
Gm26484	6	29487717 to 29487822	105	-	snRNA gene	predicted gene, 26484
Cpgi17236	6	29495839 to 29496869	1030		CpG island	CpG island 17236
Cpgi17237	6	29507587 to 29508094	507		CpG island	CpG island 17237
Gm26627	6	29507725 to 29509698	1973	+	antisense lncRNA gene	predicted gene, 26627
Tssr60095	6	29507946 to 29507974	28	-	TSS region	transcription start site region 60095
Tssr60096	6	29507979 to 29507992	13	-	TSS region	transcription start site region 60096