Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 6:29064327-29264814

37 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Lep	6	29060220 to 29073877	13657	+	protein coding gene	leptin
Gm25589	6	29113441 to 29113606	165	-	snRNA gene	predicted gene, 25589
Cia6a	6	29117972 to 29118070	98		QTL	collagen induced arthritis QTL 6a
D6Mit307	6	29117972 to 29118070	98		DNA segment	DNA Segment, Chr 6, Massachusetts Institute of Technology 307
Rbm28	6	29123573 to 29164724	41151	-	protein coding gene	RNA binding motif protein 28
Gm24303	6	29150554 to 29150679	125	-	miRNA gene	predicted gene, 24303
Tssr60068	6	29160170 to 29160195	25	-	TSS region	transcription start site region 60068
Cpgi17222	6	29164327 to 29164814	487		CpG island	CpG island 17222
Tssr60069	6	29164654 to 29164707	53	-	TSS region	transcription start site region 60069
Tssr60070	6	29164984 to 29164999	15	-	TSS region	transcription start site region 60070
Tssr60071	6	29165003 to 29165008	5	-	TSS region	transcription start site region 60071
Tssr60072	6	29165013 to 29165014	1	-	TSS region	transcription start site region 60072
Prrt4	6	29169232 to 29179584	10352	-	protein coding gene	proline-rich transmembrane protein 4
Cpgi17223	6	29169902 to 29171606	1704		CpG island	CpG island 17223
Cpgi17224	6	29178667 to 29179828	1161		CpG island	CpG island 17224
Impdh1	6	29200436 to 29216364	15928	-	protein coding gene	inosine monophosphate dehydrogenase 1
Tssr60073	6	29201157 to 29201169	12	-	TSS region	transcription start site region 60073
Cpgi17225	6	29211550 to 29212678	1128		CpG island	CpG island 17225
Tssr60074	6	29212240 to 29212291	51	-	TSS region	transcription start site region 60074
Tssr60075	6	29212296 to 29212313	17	-	TSS region	transcription start site region 60075
Tssr55214	6	29212405 to 29212427	22	+	TSS region	transcription start site region 55214
Tssr60076	6	29212455 to 29212468	13	-	TSS region	transcription start site region 60076
D6Mit180	6	29212798 to 29212915	117		DNA segment	DNA segment, Chr 6, Massachusetts Institute of Technology 180
Cpgi17226	6	29215434 to 29216662	1228		CpG island	CpG island 17226
Tssr60077	6	29216277 to 29216292	15	-	TSS region	transcription start site region 60077
Tssr60078	6	29216301 to 29216335	34	-	TSS region	transcription start site region 60078
Tssr60079	6	29216342 to 29216354	12	-	TSS region	transcription start site region 60079
Tssr55215	6	29216472 to 29216502	30	+	TSS region	transcription start site region 55215
Tssr60080	6	29232004 to 29232014	10	-	TSS region	transcription start site region 60080
Gm26021	6	29234434 to 29234564	130	+	snoRNA gene	predicted gene, 26021
Tssr60081	6	29245789 to 29245801	12	-	TSS region	transcription start site region 60081
Tssr55216	6	29246034 to 29246065	31	+	TSS region	transcription start site region 55216
Tssr55217	6	29246175 to 29246184	9	+	TSS region	transcription start site region 55217
Tssr55218	6	29248645 to 29248661	16	+	TSS region	transcription start site region 55218
Tssr60082	6	29250030 to 29250052	22	-	TSS region	transcription start site region 60082
Gm40358	6	29250291 to 29264959	14668	-	lncRNA gene	predicted gene, 40358
Tssr60083	6	29260843 to 29260862	19	-	TSS region	transcription start site region 60083