Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 6:28292938-28502951

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38 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Zfp800 6 28239927 to 28398005 158078 - protein coding gene zinc finger protein 800
Tssr60052 6 28304809 to 28304858 49 - TSS region transcription start site region 60052
Gm5303 6 28361914 to 28363165 1251 - pseudogene predicted gene 5303
Cpgi17213 6 28369343 to 28369616 273 CpG island CpG island 17213
Cpgi17214 6 28397693 to 28398101 408 CpG island CpG island 17214
Tssr60053 6 28397938 to 28397951 13 - TSS region transcription start site region 60053
Tssr60054 6 28397969 to 28397992 23 - TSS region transcription start site region 60054
Tssr60055 6 28397999 to 28398023 24 - TSS region transcription start site region 60055
Tssr60056 6 28398054 to 28398065 11 - TSS region transcription start site region 60056
Tssr60057 6 28398078 to 28398109 31 - TSS region transcription start site region 60057
Gcc1 6 28416603 to 28421724 5121 - protein coding gene golgi coiled coil 1
Cpgi17215 6 28421248 to 28421963 715 CpG island CpG island 17215
Tssr60058 6 28421527 to 28421542 15 - TSS region transcription start site region 60058
Tssr60059 6 28421564 to 28421592 28 - TSS region transcription start site region 60059
Tssr60060 6 28421680 to 28421741 61 - TSS region transcription start site region 60060
Tssr55188 6 28421769 to 28421806 37 + TSS region transcription start site region 55188
Cpgi17216 6 28423230 to 28424333 1103 CpG island CpG island 17216
Tssr55189 6 28423534 to 28423537 3 + TSS region transcription start site region 55189
Tssr55190 6 28423539 to 28423640 101 + TSS region transcription start site region 55190
Arf5 6 28423640 to 28426499 2859 + protein coding gene ADP-ribosylation factor 5
Tssr55191 6 28424337 to 28424349 12 + TSS region transcription start site region 55191
Tssr55192 6 28424572 to 28424589 17 + TSS region transcription start site region 55192
Tssr55193 6 28426233 to 28426265 32 + TSS region transcription start site region 55193
Tssr55194 6 28426294 to 28426320 26 + TSS region transcription start site region 55194
Tssr55195 6 28426343 to 28426354 11 + TSS region transcription start site region 55195
Tssr55196 6 28426379 to 28426390 11 + TSS region transcription start site region 55196
Tssr55197 6 28426492 to 28426501 9 + TSS region transcription start site region 55197
Fscn3 6 28427789 to 28438622 10833 + protein coding gene fascin actin-bundling protein 3
Tssr55198 6 28427882 to 28427909 27 + TSS region transcription start site region 55198
Tssr55199 6 28427918 to 28427925 7 + TSS region transcription start site region 55199
Pax4 6 28442334 to 28449340 7006 - protein coding gene paired box 4
Cpgi17217 6 28451265 to 28451680 415 CpG island CpG island 17217
Gm43264 6 28465565 to 28466981 1416 - pseudogene predicted gene 43264
Tssr55200 6 28475101 to 28475121 20 + TSS region transcription start site region 55200
Cpgi17218 6 28479704 to 28481099 1395 CpG island CpG island 17218
Snd1 6 28480315 to 28935162 454847 + protein coding gene staphylococcal nuclease and tudor domain containing 1
Tssr55201 6 28480337 to 28480370 33 + TSS region transcription start site region 55201
Tssr55202 6 28480386 to 28480413 27 + TSS region transcription start site region 55202