Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 6:25204777-28301870

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89 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr55186 6 25663714 to 25663715 1 + TSS region transcription start site region 55186
Gpr37 6 25668523 to 25689980 21457 - protein coding gene G protein-coupled receptor 37
Cpgi17206 6 25688374 to 25690321 1947 CpG island CpG island 17206
Tssr60000 6 25688767 to 25688781 14 - TSS region transcription start site region 60000
Tssr60001 6 25689294 to 25689305 11 - TSS region transcription start site region 60001
Tssr60002 6 25689315 to 25689339 24 - TSS region transcription start site region 60002
Tssr60003 6 25689495 to 25689506 11 - TSS region transcription start site region 60003
Tssr60004 6 25689547 to 25689561 14 - TSS region transcription start site region 60004
Tssr60005 6 25689592 to 25689608 16 - TSS region transcription start site region 60005
Tssr60006 6 25689782 to 25689800 18 - TSS region transcription start site region 60006
Tssr60007 6 25689836 to 25689854 18 - TSS region transcription start site region 60007
Tssr60008 6 25689871 to 25689898 27 - TSS region transcription start site region 60008
Tssr60009 6 25689901 to 25689915 14 - TSS region transcription start site region 60009
Tssr60010 6 25689919 to 25689966 47 - TSS region transcription start site region 60010
A930037O16Rik 6 25737796 to 25740552 2756 unclassified gene RIKEN cDNA A930037O16 gene
Pot1a 6 25743737 to 25809246 65509 - protein coding gene protection of telomeres 1A
Cpgi17207 6 25809018 to 25809409 391 CpG island CpG island 17207
Tssr60011 6 25809189 to 25809207 18 - TSS region transcription start site region 60011
Tssr60012 6 25809210 to 25809240 30 - TSS region transcription start site region 60012
Tssr60013 6 25809245 to 25809256 11 - TSS region transcription start site region 60013
Acigg7 6 25814203 to 37531775 11717572 QTL anti COL7 IgG2b antibody 7
Tssr1795 6 25931380 to 25931420 40 + TSS region transcription start site region 1795
Gm20756 6 25931426 to 25977227 45801 + lincRNA gene predicted gene, 20756
Gm6719 6 25976747 to 25977081 334 - pseudogene predicted gene 6719
D6Dcr4 6 26297041 to 26297173 132 DNA segment DNA Segment, Chr 6, Derry C. Roopenian 4
D6Mit158 6 26297075 to 26297169 94 DNA segment DNA segment, Chr 6, Massachusetts Institute of Technology 158
Sluc7 6 26297075 to 26297169 94 QTL susceptibility to lung cancer 7
Gm24691 6 26460291 to 26460430 139 - snRNA gene predicted gene, 24691
Gm30779 6 26739777 to 26766870 27093 - lncRNA gene predicted gene, 30779
Tssr60014 6 26766818 to 26766824 6 - TSS region transcription start site region 60014
Tssr60015 6 26766861 to 26766875 14 - TSS region transcription start site region 60015
Tssr60016 6 26766885 to 26766896 11 - TSS region transcription start site region 60016
Tssr60017 6 26766902 to 26766908 6 - TSS region transcription start site region 60017
Gm42474 6 26830417 to 26831158 741 + pseudogene predicted gene 42474
D6Mit297 6 26928807 to 26928928 121 DNA segment DNA segment, Chr 6, Massachusetts Institute of Technology 297
Gm38778 6 27205019 to 27218476 13457 + lncRNA gene predicted gene, 38778
D6Mit152 6 27214850 to 27214989 139 DNA segment DNA segment, Chr 6, Massachusetts Institute of Technology 152
Grm8 6 27275119 to 28135178 860059 - protein coding gene glutamate receptor, metabotropic 8
Gm42801 6 27441089 to 27443953 2864 - unclassified gene predicted gene 42801
Elads4 6 27527812 to 27527812 0 QTL ENU induced lung adenoma susceptibility 4
Gm26310 6 27668087 to 27668203 116 + snoRNA gene predicted gene, 26310
Tssr60018 6 27810130 to 27810171 41 - TSS region transcription start site region 60018
6430711C07Rik 6 27905552 to 27907231 1679 unclassified gene RIKEN cDNA 6430711C07 gene
Mir592 6 27936655 to 27936750 95 - miRNA gene microRNA 592
D6Mit89 6 28044948 to 28045094 146 DNA segment DNA segment, Chr 6, Massachusetts Institute of Technology 89
Cpgi17208 6 28133763 to 28133950 187 CpG island CpG island 17208
Tssr60019 6 28133904 to 28133934 30 - TSS region transcription start site region 60019
Tssr60020 6 28134355 to 28134385 30 - TSS region transcription start site region 60020
Cpgi17209 6 28134889 to 28136059 1170 CpG island CpG island 17209
Tssr60021 6 28135081 to 28135111 30 - TSS region transcription start site region 60021
Cpgi17210 6 28202523 to 28202853 330 CpG island CpG island 17210
Gm42547 6 28211008 to 28214805 3797 - unclassified gene predicted gene 42547
Tssr60022 6 28212896 to 28212897 1 - TSS region transcription start site region 60022
Tssr60023 6 28213252 to 28213270 18 - TSS region transcription start site region 60023
Tssr60024 6 28213821 to 28213836 15 - TSS region transcription start site region 60024
Cpgi17211 6 28214877 to 28215870 993 CpG island CpG island 17211
6530409C15Rik 6 28215555 to 28260862 45307 + antisense lncRNA gene RIKEN cDNA 6530409C15 gene
Gm42549 6 28219167 to 28226170 7003 - unclassified gene predicted gene 42549
Tssr60025 6 28228180 to 28228228 48 - TSS region transcription start site region 60025
Gm42548 6 28233081 to 28237013 3932 - unclassified gene predicted gene 42548
Tssr60026 6 28235109 to 28235118 9 - TSS region transcription start site region 60026
Tssr60027 6 28236766 to 28236770 4 - TSS region transcription start site region 60027
Tssr60028 6 28238798 to 28238826 28 - TSS region transcription start site region 60028
Tssr60029 6 28239296 to 28239299 3 - TSS region transcription start site region 60029
Zfp800 6 28239927 to 28398005 158078 - protein coding gene zinc finger protein 800
Tssr60030 6 28242333 to 28242345 12 - TSS region transcription start site region 60030
Tssr60031 6 28242373 to 28242388 15 - TSS region transcription start site region 60031
Tssr60032 6 28243769 to 28243789 20 - TSS region transcription start site region 60032
Tssr60033 6 28243794 to 28243805 11 - TSS region transcription start site region 60033
Tssr60034 6 28244221 to 28244262 41 - TSS region transcription start site region 60034
Tssr60035 6 28247135 to 28247144 9 - TSS region transcription start site region 60035
Tssr60036 6 28247213 to 28247224 11 - TSS region transcription start site region 60036
Tssr60037 6 28256496 to 28256538 42 - TSS region transcription start site region 60037
Tssr60038 6 28256565 to 28256576 11 - TSS region transcription start site region 60038
Tssr60039 6 28259235 to 28259238 3 - TSS region transcription start site region 60039
Tssr60040 6 28259922 to 28259936 14 - TSS region transcription start site region 60040
Tssr60041 6 28260032 to 28260034 2 - TSS region transcription start site region 60041
Cpgi17212 6 28260496 to 28262655 2159 CpG island CpG island 17212
Tssr60042 6 28260758 to 28260771 13 - TSS region transcription start site region 60042
Tssr60043 6 28261120 to 28261133 13 - TSS region transcription start site region 60043
Tssr60044 6 28261907 to 28261943 36 - TSS region transcription start site region 60044
Tssr60045 6 28261956 to 28261967 11 - TSS region transcription start site region 60045
Tssr55187 6 28262043 to 28262100 57 + TSS region transcription start site region 55187
Tssr60046 6 28262407 to 28262429 22 - TSS region transcription start site region 60046
Tssr60047 6 28262442 to 28262453 11 - TSS region transcription start site region 60047
Tssr60048 6 28262454 to 28262465 11 - TSS region transcription start site region 60048
Tssr60049 6 28262466 to 28262492 26 - TSS region transcription start site region 60049
Tssr60050 6 28262504 to 28262509 5 - TSS region transcription start site region 60050
Tssr60051 6 28262669 to 28262678 9 - TSS region transcription start site region 60051