Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

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Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 6:24397648-34207764

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917 genes found. Result truncated to 200 rows.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
tint 6 21480933 to 30647293 9166360 heritable phenotypic marker tail interaction with T complex
Iqub 6 24444865 to 24515067 70202 - protein coding gene IQ motif and ubiquitin domain containing
Tssr59986 6 24515036 to 24515083 47 - TSS region transcription start site region 59986
Ndufa5 6 24518662 to 24527687 9025 - protein coding gene NADH:ubiquinone oxidoreductase subunit A5
Cpgi17202 6 24526914 to 24527915 1001 CpG island CpG island 17202
Tssr59987 6 24527546 to 24527585 39 - TSS region transcription start site region 59987
Tssr59988 6 24528025 to 24528034 9 - TSS region transcription start site region 59988
Asb15 6 24528144 to 24573164 45020 + protein coding gene ankyrin repeat and SOCS box-containing 15
Tssr55166 6 24528186 to 24528200 14 + TSS region transcription start site region 55166
Tssr55167 6 24528211 to 24528218 7 + TSS region transcription start site region 55167
Tssr55168 6 24543316 to 24543325 9 + TSS region transcription start site region 55168
Tssr55169 6 24543351 to 24543366 15 + TSS region transcription start site region 55169
Tssr55170 6 24543367 to 24543409 42 + TSS region transcription start site region 55170
Tssr55171 6 24552856 to 24552859 3 + TSS region transcription start site region 55171
Gm42689 6 24594530 to 24595238 708 + pseudogene predicted gene 42689
Tssr1789 6 24597685 to 24597694 9 + TSS region transcription start site region 1789
Tssr1790 6 24597713 to 24597722 9 + TSS region transcription start site region 1790
Tssr55172 6 24597754 to 24597778 24 + TSS region transcription start site region 55172
Lmod2 6 24597771 to 24605414 7643 + protein coding gene leiomodin 2 (cardiac)
Tssr55173 6 24597810 to 24597821 11 + TSS region transcription start site region 55173
Tssr1791 6 24597904 to 24597915 11 + TSS region transcription start site region 1791
Tssr1792 6 24598022 to 24598036 14 + TSS region transcription start site region 1792
Tssr1793 6 24598084 to 24598091 7 + TSS region transcription start site region 1793
Tssr1794 6 24598101 to 24598105 4 + TSS region transcription start site region 1794
Tssr55174 6 24603323 to 24603341 18 + TSS region transcription start site region 55174
Tssr55175 6 24603369 to 24603381 12 + TSS region transcription start site region 55175
Tssr59989 6 24603404 to 24603469 65 - TSS region transcription start site region 59989
Cpgi17203 6 24603645 to 24604013 368 CpG island CpG island 17203
Wasl 6 24613810 to 24664995 51185 - protein coding gene Wiskott-Aldrich syndrome-like (human)
Tssr59990 6 24619594 to 24619609 15 - TSS region transcription start site region 59990
Tssr59991 6 24653670 to 24653674 4 - TSS region transcription start site region 59991
Gm42856 6 24657518 to 24660369 2851 - unclassified gene predicted gene 42856
Cpgi17204 6 24664214 to 24665532 1318 CpG island CpG island 17204
Tssr59992 6 24664872 to 24664896 24 - TSS region transcription start site region 59992
Tssr59993 6 24664897 to 24664917 20 - TSS region transcription start site region 59993
Tssr59994 6 24664921 to 24664957 36 - TSS region transcription start site region 59994
Tssr59995 6 24664960 to 24665038 78 - TSS region transcription start site region 59995
Tssr55176 6 24733241 to 24733248 7 + TSS region transcription start site region 55176
Hyal6 6 24733245 to 24745452 12207 + protein coding gene hyaluronoglucosaminidase 6
Tssr55177 6 24733251 to 24733295 44 + TSS region transcription start site region 55177
Tssr55178 6 24748325 to 24748356 31 + TSS region transcription start site region 55178
Hyal4 6 24748367 to 24766519 18152 + protein coding gene hyaluronoglucosaminidase 4
Gm38776 6 24766278 to 24775246 8968 - lncRNA gene predicted gene, 38776
Tssr55179 6 24791175 to 24791206 31 + TSS region transcription start site region 55179
Spam1 6 24791188 to 24801048 9860 + protein coding gene sperm adhesion molecule 1
Tssr55180 6 24791215 to 24791223 8 + TSS region transcription start site region 55180
Gm18327 6 24837294 to 24838123 829 + pseudogene predicted gene, 18327
Tssr55181 6 24857969 to 24858001 32 + TSS region transcription start site region 55181
Hyal5 6 24857997 to 24891958 33961 + protein coding gene hyaluronoglucosaminidase 5
Tssr55182 6 24858003 to 24858017 14 + TSS region transcription start site region 55182
Tssr55183 6 24863870 to 24863919 49 + TSS region transcription start site region 55183
Tssr55184 6 24863923 to 24863928 5 + TSS region transcription start site region 55184
Tssr55185 6 24890500 to 24890516 16 + TSS region transcription start site region 55185
Gm22267 6 24894670 to 24894800 130 - snoRNA gene predicted gene, 22267
Tmem229a 6 24951141 to 24956125 4984 - protein coding gene transmembrane protein 229A
Tssr59996 6 24953644 to 24953650 6 - TSS region transcription start site region 59996
Cpgi17205 6 24954812 to 24956482 1670 CpG island CpG island 17205
Tssr59997 6 24956071 to 24956105 34 - TSS region transcription start site region 59997
Tssr59998 6 24956106 to 24956131 25 - TSS region transcription start site region 59998
Tssr59999 6 24956348 to 24956371 23 - TSS region transcription start site region 59999
D6Mit171 6 24959860 to 24959963 103 DNA segment DNA segment, Chr 6, Massachusetts Institute of Technology 171
D6Mit380 6 24970516 to 24970663 147 DNA segment DNA Segment, Chr 6, Massachusetts Institute of Technology-380
Bmiq7 6 25000000 to 80000000 55000000 QTL body mass index QTL 7
Gm38777 6 25033141 to 25057466 24325 + lncRNA gene predicted gene, 38777
Gm5302 6 25046503 to 25047298 795 - pseudogene predicted gene 5302
Gm24443 6 25078772 to 25078903 131 - snoRNA gene predicted gene, 24443
Gm30658 6 25126989 to 25183991 57002 - lncRNA gene predicted gene, 30658
D6Mit116 6 25150229 to 25150350 121 DNA segment DNA segment, Chr 6, Massachusetts Institute of Technology 116
Gm22529 6 25199929 to 25200051 122 - snoRNA gene predicted gene, 22529
Tssr55186 6 25663714 to 25663715 1 + TSS region transcription start site region 55186
Gpr37 6 25668523 to 25689980 21457 - protein coding gene G protein-coupled receptor 37
Cpgi17206 6 25688374 to 25690321 1947 CpG island CpG island 17206
Tssr60000 6 25688767 to 25688781 14 - TSS region transcription start site region 60000
Tssr60001 6 25689294 to 25689305 11 - TSS region transcription start site region 60001
Tssr60002 6 25689315 to 25689339 24 - TSS region transcription start site region 60002
Tssr60003 6 25689495 to 25689506 11 - TSS region transcription start site region 60003
Tssr60004 6 25689547 to 25689561 14 - TSS region transcription start site region 60004
Tssr60005 6 25689592 to 25689608 16 - TSS region transcription start site region 60005
Tssr60006 6 25689782 to 25689800 18 - TSS region transcription start site region 60006
Tssr60007 6 25689836 to 25689854 18 - TSS region transcription start site region 60007
Tssr60008 6 25689871 to 25689898 27 - TSS region transcription start site region 60008
Tssr60009 6 25689901 to 25689915 14 - TSS region transcription start site region 60009
Tssr60010 6 25689919 to 25689966 47 - TSS region transcription start site region 60010
A930037O16Rik 6 25737796 to 25740552 2756 unclassified gene RIKEN cDNA A930037O16 gene
Pot1a 6 25743737 to 25809246 65509 - protein coding gene protection of telomeres 1A
Cpgi17207 6 25809018 to 25809409 391 CpG island CpG island 17207
Tssr60011 6 25809189 to 25809207 18 - TSS region transcription start site region 60011
Tssr60012 6 25809210 to 25809240 30 - TSS region transcription start site region 60012
Tssr60013 6 25809245 to 25809256 11 - TSS region transcription start site region 60013
Acigg7 6 25814203 to 37531775 11717572 QTL anti COL7 IgG2b antibody 7
Tssr1795 6 25931380 to 25931420 40 + TSS region transcription start site region 1795
Gm20756 6 25931426 to 25977227 45801 + lincRNA gene predicted gene, 20756
Gm6719 6 25976747 to 25977081 334 - pseudogene predicted gene 6719
D6Dcr4 6 26297041 to 26297173 132 DNA segment DNA Segment, Chr 6, Derry C. Roopenian 4
Sluc7 6 26297075 to 26297169 94 QTL susceptibility to lung cancer 7
D6Mit158 6 26297075 to 26297169 94 DNA segment DNA segment, Chr 6, Massachusetts Institute of Technology 158
Gm24691 6 26460291 to 26460430 139 - snRNA gene predicted gene, 24691
Gm30779 6 26739777 to 26766870 27093 - lncRNA gene predicted gene, 30779
Tssr60014 6 26766818 to 26766824 6 - TSS region transcription start site region 60014
Tssr60015 6 26766861 to 26766875 14 - TSS region transcription start site region 60015
Tssr60016 6 26766885 to 26766896 11 - TSS region transcription start site region 60016
Tssr60017 6 26766902 to 26766908 6 - TSS region transcription start site region 60017
Gm42474 6 26830417 to 26831158 741 + pseudogene predicted gene 42474
D6Mit297 6 26928807 to 26928928 121 DNA segment DNA segment, Chr 6, Massachusetts Institute of Technology 297
Gm38778 6 27205019 to 27218476 13457 + lncRNA gene predicted gene, 38778
D6Mit152 6 27214850 to 27214989 139 DNA segment DNA segment, Chr 6, Massachusetts Institute of Technology 152
Grm8 6 27275119 to 28135178 860059 - protein coding gene glutamate receptor, metabotropic 8
Gm42801 6 27441089 to 27443953 2864 - unclassified gene predicted gene 42801
Elads4 6 27527812 to 27527812 0 QTL ENU induced lung adenoma susceptibility 4
Gm26310 6 27668087 to 27668203 116 + snoRNA gene predicted gene, 26310
Tssr60018 6 27810130 to 27810171 41 - TSS region transcription start site region 60018
6430711C07Rik 6 27905552 to 27907231 1679 unclassified gene RIKEN cDNA 6430711C07 gene
Mir592 6 27936655 to 27936750 95 - miRNA gene microRNA 592
D6Mit89 6 28044948 to 28045094 146 DNA segment DNA segment, Chr 6, Massachusetts Institute of Technology 89
Cpgi17208 6 28133763 to 28133950 187 CpG island CpG island 17208
Tssr60019 6 28133904 to 28133934 30 - TSS region transcription start site region 60019
Tssr60020 6 28134355 to 28134385 30 - TSS region transcription start site region 60020
Cpgi17209 6 28134889 to 28136059 1170 CpG island CpG island 17209
Tssr60021 6 28135081 to 28135111 30 - TSS region transcription start site region 60021
Cpgi17210 6 28202523 to 28202853 330 CpG island CpG island 17210
Gm42547 6 28211008 to 28214805 3797 - unclassified gene predicted gene 42547
Tssr60022 6 28212896 to 28212897 1 - TSS region transcription start site region 60022
Tssr60023 6 28213252 to 28213270 18 - TSS region transcription start site region 60023
Tssr60024 6 28213821 to 28213836 15 - TSS region transcription start site region 60024
Cpgi17211 6 28214877 to 28215870 993 CpG island CpG island 17211
6530409C15Rik 6 28215555 to 28260862 45307 + antisense lncRNA gene RIKEN cDNA 6530409C15 gene
Gm42549 6 28219167 to 28226170 7003 - unclassified gene predicted gene 42549
Tssr60025 6 28228180 to 28228228 48 - TSS region transcription start site region 60025
Gm42548 6 28233081 to 28237013 3932 - unclassified gene predicted gene 42548
Tssr60026 6 28235109 to 28235118 9 - TSS region transcription start site region 60026
Tssr60027 6 28236766 to 28236770 4 - TSS region transcription start site region 60027
Tssr60028 6 28238798 to 28238826 28 - TSS region transcription start site region 60028
Tssr60029 6 28239296 to 28239299 3 - TSS region transcription start site region 60029
Zfp800 6 28239927 to 28398005 158078 - protein coding gene zinc finger protein 800
Tssr60030 6 28242333 to 28242345 12 - TSS region transcription start site region 60030
Tssr60031 6 28242373 to 28242388 15 - TSS region transcription start site region 60031
Tssr60032 6 28243769 to 28243789 20 - TSS region transcription start site region 60032
Tssr60033 6 28243794 to 28243805 11 - TSS region transcription start site region 60033
Tssr60034 6 28244221 to 28244262 41 - TSS region transcription start site region 60034
Tssr60035 6 28247135 to 28247144 9 - TSS region transcription start site region 60035
Tssr60036 6 28247213 to 28247224 11 - TSS region transcription start site region 60036
Tssr60037 6 28256496 to 28256538 42 - TSS region transcription start site region 60037
Tssr60038 6 28256565 to 28256576 11 - TSS region transcription start site region 60038
Tssr60039 6 28259235 to 28259238 3 - TSS region transcription start site region 60039
Tssr60040 6 28259922 to 28259936 14 - TSS region transcription start site region 60040
Tssr60041 6 28260032 to 28260034 2 - TSS region transcription start site region 60041
Cpgi17212 6 28260496 to 28262655 2159 CpG island CpG island 17212
Tssr60042 6 28260758 to 28260771 13 - TSS region transcription start site region 60042
Tssr60043 6 28261120 to 28261133 13 - TSS region transcription start site region 60043
Tssr60044 6 28261907 to 28261943 36 - TSS region transcription start site region 60044
Tssr60045 6 28261956 to 28261967 11 - TSS region transcription start site region 60045
Tssr55187 6 28262043 to 28262100 57 + TSS region transcription start site region 55187
Tssr60046 6 28262407 to 28262429 22 - TSS region transcription start site region 60046
Tssr60047 6 28262442 to 28262453 11 - TSS region transcription start site region 60047
Tssr60048 6 28262454 to 28262465 11 - TSS region transcription start site region 60048
Tssr60049 6 28262466 to 28262492 26 - TSS region transcription start site region 60049
Tssr60050 6 28262504 to 28262509 5 - TSS region transcription start site region 60050
Tssr60051 6 28262669 to 28262678 9 - TSS region transcription start site region 60051
Tssr60052 6 28304809 to 28304858 49 - TSS region transcription start site region 60052
Gm5303 6 28361914 to 28363165 1251 - pseudogene predicted gene 5303
Cpgi17213 6 28369343 to 28369616 273 CpG island CpG island 17213
Cpgi17214 6 28397693 to 28398101 408 CpG island CpG island 17214
Tssr60053 6 28397938 to 28397951 13 - TSS region transcription start site region 60053
Tssr60054 6 28397969 to 28397992 23 - TSS region transcription start site region 60054
Tssr60055 6 28397999 to 28398023 24 - TSS region transcription start site region 60055
Tssr60056 6 28398054 to 28398065 11 - TSS region transcription start site region 60056
Tssr60057 6 28398078 to 28398109 31 - TSS region transcription start site region 60057
Gcc1 6 28416603 to 28421724 5121 - protein coding gene golgi coiled coil 1
Cpgi17215 6 28421248 to 28421963 715 CpG island CpG island 17215
Tssr60058 6 28421527 to 28421542 15 - TSS region transcription start site region 60058
Tssr60059 6 28421564 to 28421592 28 - TSS region transcription start site region 60059
Tssr60060 6 28421680 to 28421741 61 - TSS region transcription start site region 60060
Tssr55188 6 28421769 to 28421806 37 + TSS region transcription start site region 55188
Cpgi17216 6 28423230 to 28424333 1103 CpG island CpG island 17216
Tssr55189 6 28423534 to 28423537 3 + TSS region transcription start site region 55189
Tssr55190 6 28423539 to 28423640 101 + TSS region transcription start site region 55190
Arf5 6 28423640 to 28426499 2859 + protein coding gene ADP-ribosylation factor 5
Tssr55191 6 28424337 to 28424349 12 + TSS region transcription start site region 55191
Tssr55192 6 28424572 to 28424589 17 + TSS region transcription start site region 55192
Tssr55193 6 28426233 to 28426265 32 + TSS region transcription start site region 55193
Tssr55194 6 28426294 to 28426320 26 + TSS region transcription start site region 55194
Tssr55195 6 28426343 to 28426354 11 + TSS region transcription start site region 55195
Tssr55196 6 28426379 to 28426390 11 + TSS region transcription start site region 55196
Tssr55197 6 28426492 to 28426501 9 + TSS region transcription start site region 55197
Fscn3 6 28427789 to 28438622 10833 + protein coding gene fascin actin-bundling protein 3
Tssr55198 6 28427882 to 28427909 27 + TSS region transcription start site region 55198
Tssr55199 6 28427918 to 28427925 7 + TSS region transcription start site region 55199
Pax4 6 28442334 to 28449340 7006 - protein coding gene paired box 4
Cpgi17217 6 28451265 to 28451680 415 CpG island CpG island 17217
Gm43264 6 28465565 to 28466981 1416 - pseudogene predicted gene 43264
Tssr55200 6 28475101 to 28475121 20 + TSS region transcription start site region 55200
Cpgi17218 6 28479704 to 28481099 1395 CpG island CpG island 17218
Snd1 6 28480315 to 28935162 454847 + protein coding gene staphylococcal nuclease and tudor domain containing 1
Tssr55201 6 28480337 to 28480370 33 + TSS region transcription start site region 55201
Tssr55202 6 28480386 to 28480413 27 + TSS region transcription start site region 55202
Tssr1796 6 28522226 to 28522229 3 + TSS region transcription start site region 1796
Tssr55203 6 28556383 to 28556385 2 + TSS region transcription start site region 55203
Gm37321 6 28563490 to 28565361 1871 + unclassified gene predicted gene, 37321
Gm37978 6 28568072 to 28570986 2914 + unclassified gene predicted gene, 37978
Tssr55204 6 28587424 to 28587435 11 + TSS region transcription start site region 55204