Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 6:23389161-24550060

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50 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cadps2 6 23262773 to 23839421 576648 - protein coding gene Ca2+-dependent activator protein for secretion 2
Gm27959 6 23519746 to 23519856 110 + rRNA gene predicted gene, 27959
Gm38775 6 23573427 to 23583348 9921 + lncRNA gene predicted gene, 38775
Gm24217 6 23639824 to 23639956 132 - rRNA gene predicted gene, 24217
Rnf133 6 23648869 to 23650305 1436 - protein coding gene ring finger protein 133
Tssr59965 6 23650255 to 23650271 16 - TSS region transcription start site region 59965
Tssr59966 6 23650274 to 23650288 14 - TSS region transcription start site region 59966
Tssr59967 6 23650298 to 23650309 11 - TSS region transcription start site region 59967
Rnf148 6 23653898 to 23655136 1238 - protein coding gene ring finger protein 148
Tssr59968 6 23655129 to 23655140 11 - TSS region transcription start site region 59968
Tssr59969 6 23655142 to 23655168 26 - TSS region transcription start site region 59969
Tssr59970 6 23655180 to 23655190 10 - TSS region transcription start site region 59970
Gm18966 6 23736495 to 23738126 1631 + pseudogene predicted gene, 18966
Tssr59971 6 23804603 to 23804609 6 - TSS region transcription start site region 59971
Tssr59972 6 23824796 to 23824798 2 - TSS region transcription start site region 59972
Cpgi17200 6 23838491 to 23840076 1585 CpG island CpG island 17200
Tssr59973 6 23839243 to 23839267 24 - TSS region transcription start site region 59973
Tssr59974 6 23839286 to 23839315 29 - TSS region transcription start site region 59974
Tssr59975 6 23839322 to 23839333 11 - TSS region transcription start site region 59975
Tssr59976 6 23839471 to 23839487 16 - TSS region transcription start site region 59976
Tssr59977 6 23839491 to 23839514 23 - TSS region transcription start site region 59977
Tssr59978 6 23839525 to 23839547 22 - TSS region transcription start site region 59978
Tssr55164 6 23947773 to 23947774 1 + TSS region transcription start site region 55164
Tas2r118 6 23969161 to 23970060 899 - protein coding gene taste receptor, type 2, member 118
Slc13a1 6 24088283 to 24168092 79809 - protein coding gene solute carrier family 13 (sodium/sulfate symporters), member 1
Tssr59979 6 24092359 to 24092361 2 - TSS region transcription start site region 59979
Tssr59980 6 24103984 to 24104021 37 - TSS region transcription start site region 59980
Tssr59981 6 24104140 to 24104156 16 - TSS region transcription start site region 59981
Tssr55165 6 24125667 to 24125669 2 + TSS region transcription start site region 55165
Gm20706 6 24138341 to 24140363 2022 - pseudogene predicted gene 20706
Gm26386 6 24143368 to 24143468 100 + miRNA gene predicted gene, 26386
Tssr59982 6 24168083 to 24168097 14 - TSS region transcription start site region 59982
Tssr59983 6 24212312 to 24212345 33 - TSS region transcription start site region 59983
Tssr59984 6 24275418 to 24275421 3 - TSS region transcription start site region 59984
Gm3136 6 24343252 to 24344590 1338 + pseudogene predicted gene 3136
Tssr59985 6 24373269 to 24373278 9 - TSS region transcription start site region 59985
D6Mit170 6 24381333 to 24381528 195 DNA segment DNA segment, Chr 6, Massachusetts Institute of Technology 170
Cpgi17201 6 24383842 to 24384105 263 CpG island CpG island 17201
Iqub 6 24444865 to 24515067 70202 - protein coding gene IQ motif and ubiquitin domain containing
Tssr59986 6 24515036 to 24515083 47 - TSS region transcription start site region 59986
Ndufa5 6 24518662 to 24527687 9025 - protein coding gene NADH:ubiquinone oxidoreductase subunit A5
Cpgi17202 6 24526914 to 24527915 1001 CpG island CpG island 17202
Tssr59987 6 24527546 to 24527585 39 - TSS region transcription start site region 59987
Tssr59988 6 24528025 to 24528034 9 - TSS region transcription start site region 59988
Asb15 6 24528144 to 24573164 45020 + protein coding gene ankyrin repeat and SOCS box-containing 15
Tssr55166 6 24528186 to 24528200 14 + TSS region transcription start site region 55166
Tssr55167 6 24528211 to 24528218 7 + TSS region transcription start site region 55167
Tssr55168 6 24543316 to 24543325 9 + TSS region transcription start site region 55168
Tssr55169 6 24543351 to 24543366 15 + TSS region transcription start site region 55169
Tssr55170 6 24543367 to 24543409 42 + TSS region transcription start site region 55170