Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 6:22213154-22964138

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38 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cped1 6 21985916 to 22256404 270488 + protein coding gene cadherin-like and PC-esterase domain containing 1
Gm42573 6 22245457 to 22245934 477 - pseudogene predicted gene 42573
Tssr55151 6 22288221 to 22288238 17 + TSS region transcription start site region 55151
Wnt16 6 22288227 to 22298522 10295 + protein coding gene wingless-type MMTV integration site family, member 16
Cpgi17191 6 22288508 to 22289572 1064 CpG island CpG island 17191
Fam3c 6 22306520 to 22356081 49561 - protein coding gene family with sequence similarity 3, member C
Tssr59937 6 22306868 to 22306872 4 - TSS region transcription start site region 59937
Tssr59938 6 22307041 to 22307052 11 - TSS region transcription start site region 59938
Tssr59939 6 22326462 to 22326465 3 - TSS region transcription start site region 59939
Tssr59940 6 22329607 to 22329625 18 - TSS region transcription start site region 59940
Tssr55152 6 22330831 to 22330835 4 + TSS region transcription start site region 55152
Tssr59941 6 22343455 to 22343461 6 - TSS region transcription start site region 59941
Tssr59942 6 22343710 to 22343720 10 - TSS region transcription start site region 59942
Cpgi17192 6 22355578 to 22356502 924 CpG island CpG island 17192
Tssr59943 6 22355990 to 22356007 17 - TSS region transcription start site region 59943
Tssr59944 6 22356012 to 22356053 41 - TSS region transcription start site region 59944
Tssr59945 6 22356068 to 22356175 107 - TSS region transcription start site region 59945
Tssr59946 6 22356176 to 22356190 14 - TSS region transcription start site region 59946
Gm38773 6 22389609 to 22392083 2474 - lncRNA gene predicted gene, 38773
Tssr59947 6 22391754 to 22391767 13 - TSS region transcription start site region 59947
Tssr59948 6 22392065 to 22392073 8 - TSS region transcription start site region 59948
Tssr55153 6 22440128 to 22440142 14 + TSS region transcription start site region 55153
Tssr59949 6 22444429 to 22444437 8 - TSS region transcription start site region 59949
Gm38774 6 22543154 to 22634138 90984 - lncRNA gene predicted gene, 38774
Gm43630 6 22622918 to 22623693 775 + pseudogene predicted gene 43630
Gm8927 6 22703436 to 22704416 980 + pseudogene predicted gene 8927
D6Mit85 6 22718766 to 22718877 111 DNA segment DNA segment, Chr 6, Massachusetts Institute of Technology 85
Gm8930 6 22733733 to 22734500 767 + pseudogene predicted gene 8930
Gm18861 6 22759399 to 22760584 1185 + pseudogene predicted gene, 18861
Gm23961 6 22768106 to 22768202 96 - miRNA gene predicted gene, 23961
Gm25942 6 22789818 to 22789927 109 + miRNA gene predicted gene, 25942
Gm43629 6 22804626 to 22805329 703 - pseudogene predicted gene 43629
Cpgi17193 6 22875234 to 22876343 1109 CpG island CpG island 17193
Tssr55154 6 22875496 to 22875512 16 + TSS region transcription start site region 55154
Ptprz1 6 22875502 to 23052916 177414 + protein coding gene protein tyrosine phosphatase, receptor type Z, polypeptide 1
Tssr55155 6 22875522 to 22875537 15 + TSS region transcription start site region 55155
Tssr55156 6 22926417 to 22926420 3 + TSS region transcription start site region 55156
Tssr55157 6 22936477 to 22936479 2 + TSS region transcription start site region 55157