Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 6:21671395-21952515

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21 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Kcnd2 6 21216109 to 21729805 513696 + protein coding gene potassium voltage-gated channel, Shal-related family, member 2
5330437M03Rik 6 21681301 to 21685383 4082 + unclassified gene RIKEN cDNA 5330437M03 gene
Tspan12 6 21771395 to 21852515 81120 - protein coding gene tetraspanin 12
Tssr59927 6 21784047 to 21784051 4 - TSS region transcription start site region 59927
Cpgi17188 6 21851485 to 21852397 912 CpG island CpG island 17188
Tssr59928 6 21852126 to 21852183 57 - TSS region transcription start site region 59928
Gm30270 6 21852418 to 21853483 1065 + antisense lncRNA gene predicted gene, 30270
Tssr59929 6 21852434 to 21852443 9 - TSS region transcription start site region 59929
Tssr59930 6 21852509 to 21852520 11 - TSS region transcription start site region 59930
Tssr59931 6 21852523 to 21852540 17 - TSS region transcription start site region 59931
Gm3289 6 21852981 to 21858178 5197 - lincRNA gene predicted gene 3289
Tssr59932 6 21856338 to 21856339 1 - TSS region transcription start site region 59932
Tssr59933 6 21858134 to 21858139 5 - TSS region transcription start site region 59933
Tssr59934 6 21858164 to 21858183 19 - TSS region transcription start site region 59934
Tssr59935 6 21858712 to 21858729 17 - TSS region transcription start site region 59935
Tssr59936 6 21924900 to 21924943 43 - TSS region transcription start site region 59936
Cpgi17189 6 21949201 to 21950428 1227 CpG island CpG island 17189
Ing3 6 21949571 to 21976038 26467 + protein coding gene inhibitor of growth family, member 3
Tssr55136 6 21949634 to 21949683 49 + TSS region transcription start site region 55136
Tssr55137 6 21949988 to 21950062 74 + TSS region transcription start site region 55137
Tssr55138 6 21950378 to 21950401 23 + TSS region transcription start site region 55138