Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 6:18814609-20434715

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31 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm5874 6 18824552 to 18825059 507 + pseudogene predicted gene 5874
Gm26809 6 18844220 to 18847360 3140 + lincRNA gene predicted gene, 26809
Gm20186 6 18845910 to 18848207 2297 - lincRNA gene predicted gene, 20186
Cpgi17186 6 18848268 to 18849042 774 CpG island CpG island 17186
Tssr59924 6 18848452 to 18848538 86 - TSS region transcription start site region 59924
Tssr55110 6 18848571 to 18848582 11 + TSS region transcription start site region 55110
Tssr55111 6 18848584 to 18848600 16 + TSS region transcription start site region 55111
Tssr55112 6 18848604 to 18848693 89 + TSS region transcription start site region 55112
Lsm8 6 18848635 to 18854052 5417 + protein coding gene LSM8 homolog, U6 small nuclear RNA associated
Tssr55113 6 18848697 to 18848709 12 + TSS region transcription start site region 55113
Tssr55114 6 18853646 to 18853668 22 + TSS region transcription start site region 55114
Tssr55115 6 18866309 to 18866333 24 + TSS region transcription start site region 55115
Ankrd7 6 18866318 to 18879586 13268 + protein coding gene ankyrin repeat domain 7
Tssr55116 6 18866342 to 18866355 13 + TSS region transcription start site region 55116
Tssr55117 6 18866367 to 18866371 4 + TSS region transcription start site region 55117
Tssr55118 6 18866387 to 18866391 4 + TSS region transcription start site region 55118
Gm43498 6 18882711 to 18884196 1485 + pseudogene predicted gene 43498
Gm22718 6 19046837 to 19047151 314 + unclassified non-coding RNA gene predicted gene, 22718
Gm6655 6 19119469 to 19120777 1308 + pseudogene predicted gene 6655
4930524B17Rik 6 19247899 to 19278843 30944 - lincRNA gene RIKEN cDNA 4930524B17 gene
Eif3s6-ps4 6 19318021 to 19319400 1379 - pseudogene eukaryotic translation initiation factor 3, subunit 6, pseudogene 4
Gm24213 6 19341329 to 19341586 257 - unclassified non-coding RNA gene predicted gene, 24213
Mir6370 6 19555342 to 19555461 119 + miRNA gene microRNA 6370
Gm22828 6 19624609 to 19624715 106 + snRNA gene predicted gene, 22828
D6Mit346 6 19691866 to 19691982 116 DNA segment DNA segment, Chr 6, Massachusetts Institute of Technology 346
Gm18482 6 19773975 to 19777551 3576 - pseudogene predicted gene, 18482
Gm43501 6 19784686 to 19784792 106 + pseudogene predicted gene 43501
Gm42581 6 19788053 to 19789018 965 + pseudogene predicted gene 42581
D6Mit167 6 19814700 to 19814829 129 DNA segment DNA segment, Chr 6, Massachusetts Institute of Technology 167
Sxbq2 6 19912686 to 71322775 51410089 QTL SGC/Knj cross B6 QTL 2
D6Mit88 6 19912686 to 19912833 147 DNA segment DNA segment, Chr 6, Massachusetts Institute of Technology 88