MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 6:18040142-18181961

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Asz1	6	18050964 to 18109061	58097	-	protein coding gene	ankyrin repeat, SAM and basic leucine zipper domain containing 1
Cpgi17183	6	18108833 to 18109264	431		CpG island	CpG island 17183
Tssr59913	6	18109038 to 18109062	24	-	TSS region	transcription start site region 59913
Tssr59914	6	18109063 to 18109084	21	-	TSS region	transcription start site region 59914
Tssr59915	6	18109113 to 18109118	5	-	TSS region	transcription start site region 59915
Tssr55101	6	18109159 to 18109179	20	+	TSS region	transcription start site region 55101
Gm43845	6	18110142 to 18111961	1819	-	unclassified gene	predicted gene 43845
Gm15593	6	18144734 to 18145741	1007	+	pseudogene	predicted gene 15593
Gm15596	6	18156340 to 18157120	780	-	pseudogene	predicted gene 15596
Tssr55102	6	18169791 to 18169812	21	+	TSS region	transcription start site region 55102
Tssr55103	6	18169814 to 18169833	19	+	TSS region	transcription start site region 55103
Tssr1787	6	18169838 to 18169844	6	+	TSS region	transcription start site region 1787
Cpgi17184	6	18170239 to 18170842	603		CpG island	CpG island 17184
Tssr55104	6	18170560 to 18170620	60	+	TSS region	transcription start site region 55104
Cftr	6	18170687 to 18322768	152081	+	protein coding gene	cystic fibrosis transmembrane conductance regulator
Tssr55105	6	18170742 to 18170756	14	+	TSS region	transcription start site region 55105
Tssr55106	6	18170758 to 18170780	22	+	TSS region	transcription start site region 55106
Tssr55107	6	18170782 to 18170798	16	+	TSS region	transcription start site region 55107