Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 6:17785976-18186162

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33 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
St7 6 17692940 to 17943023 250083 + protein coding gene suppression of tumorigenicity 7
Tssr55100 6 17822963 to 17822988 25 + TSS region transcription start site region 55100
Gm26738 6 17834585 to 17835185 600 - antisense lncRNA gene predicted gene, 26738
Cpgi17180 6 17840402 to 17840995 593 CpG island CpG island 17180
Gm27444 6 17905707 to 17905843 136 + unclassified non-coding RNA gene predicted gene, 27444
Gm27402 6 17907172 to 17907291 119 + unclassified non-coding RNA gene predicted gene, 27402
Gm43844 6 17914996 to 17920600 5604 + unclassified gene predicted gene 43844
D6Rck2 6 17985976 to 17986162 186 DNA segment DNA segment, Chr 6, Rockefeller University 2
Wnt2 6 17988940 to 18030585 41645 - protein coding gene wingless-type MMTV integration site family, member 2
Mdq13 6 18014442 to 18014442 0 QTL mammary ductal QTL 13
Cpgi17181 6 18030112 to 18030816 704 CpG island CpG island 17181
Tssr59910 6 18030344 to 18030389 45 - TSS region transcription start site region 59910
Tssr59911 6 18030393 to 18030403 10 - TSS region transcription start site region 59911
Tssr59912 6 18030435 to 18030460 25 - TSS region transcription start site region 59912
Cpgi17182 6 18031509 to 18032107 598 CpG island CpG island 17182
Asz1 6 18050964 to 18109061 58097 - protein coding gene ankyrin repeat, SAM and basic leucine zipper domain containing 1
Cpgi17183 6 18108833 to 18109264 431 CpG island CpG island 17183
Tssr59913 6 18109038 to 18109062 24 - TSS region transcription start site region 59913
Tssr59914 6 18109063 to 18109084 21 - TSS region transcription start site region 59914
Tssr59915 6 18109113 to 18109118 5 - TSS region transcription start site region 59915
Tssr55101 6 18109159 to 18109179 20 + TSS region transcription start site region 55101
Gm43845 6 18110142 to 18111961 1819 - unclassified gene predicted gene 43845
Gm15593 6 18144734 to 18145741 1007 + pseudogene predicted gene 15593
Gm15596 6 18156340 to 18157120 780 - pseudogene predicted gene 15596
Tssr55102 6 18169791 to 18169812 21 + TSS region transcription start site region 55102
Tssr55103 6 18169814 to 18169833 19 + TSS region transcription start site region 55103
Tssr1787 6 18169838 to 18169844 6 + TSS region transcription start site region 1787
Cpgi17184 6 18170239 to 18170842 603 CpG island CpG island 17184
Tssr55104 6 18170560 to 18170620 60 + TSS region transcription start site region 55104
Cftr 6 18170687 to 18322768 152081 + protein coding gene cystic fibrosis transmembrane conductance regulator
Tssr55105 6 18170742 to 18170756 14 + TSS region transcription start site region 55105
Tssr55106 6 18170758 to 18170780 22 + TSS region transcription start site region 55106
Tssr55107 6 18170782 to 18170798 16 + TSS region transcription start site region 55107