Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 6:16391724-17281733

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44 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm36406 6 16457390 to 16469950 12560 - lncRNA gene predicted gene, 36406
Tssr59885 6 16469892 to 16469908 16 - TSS region transcription start site region 59885
Gm36503 6 16550387 to 16579873 29486 + lincRNA gene predicted gene, 36503
D6Mit264 6 16668914 to 16669037 123 DNA segment DNA segment, Chr 6, Massachusetts Institute of Technology 264
Gm36669 6 16777524 to 16788512 10988 + lincRNA gene predicted gene, 36669
Tfec 6 16833373 to 16898441 65068 - protein coding gene transcription factor EC
Tssr59886 6 16836724 to 16836733 9 - TSS region transcription start site region 59886
Tssr59887 6 16836862 to 16836888 26 - TSS region transcription start site region 59887
Tssr59888 6 16836978 to 16837005 27 - TSS region transcription start site region 59888
Tssr59889 6 16837039 to 16837058 19 - TSS region transcription start site region 59889
Tssr59890 6 16837084 to 16837117 33 - TSS region transcription start site region 59890
Tssr59891 6 16837214 to 16837231 17 - TSS region transcription start site region 59891
Tssr59892 6 16837603 to 16837617 14 - TSS region transcription start site region 59892
Tssr59893 6 16846281 to 16846305 24 - TSS region transcription start site region 59893
Tssr59894 6 16852355 to 16852367 12 - TSS region transcription start site region 59894
Tssr59895 6 16855948 to 16856002 54 - TSS region transcription start site region 59895
Tssr59896 6 16884018 to 16884029 11 - TSS region transcription start site region 59896
Tssr59897 6 16898309 to 16898318 9 - TSS region transcription start site region 59897
Tssr59898 6 16898347 to 16898391 44 - TSS region transcription start site region 59898
Tssr59899 6 16898395 to 16898416 21 - TSS region transcription start site region 59899
Tssr59900 6 16898418 to 16898436 18 - TSS region transcription start site region 59900
Tssr59901 6 16898443 to 16898459 16 - TSS region transcription start site region 59901
Tssr59902 6 16898460 to 16898471 11 - TSS region transcription start site region 59902
Gm5721 6 16925231 to 16926919 1688 + pseudogene predicted gene 5721
Gm15473 6 17058806 to 17064996 6190 - lincRNA gene predicted gene 15473
Cpgi17172 6 17064841 to 17065782 941 CpG island CpG island 17172
Tssr55024 6 17065129 to 17065233 104 + TSS region transcription start site region 55024
Tes 6 17065149 to 17105825 40676 + protein coding gene testis derived transcript
Tssr59903 6 17065464 to 17065509 45 - TSS region transcription start site region 59903
Gm4876 6 17086610 to 17094502 7892 - antisense lncRNA gene predicted gene 4876
D6Mit347 6 17095940 to 17096059 119 DNA segment DNA segment, Chr 6, Massachusetts Institute of Technology 347
Tssr55025 6 17105329 to 17105377 48 + TSS region transcription start site region 55025
Tssr59904 6 17171567 to 17171578 11 - TSS region transcription start site region 59904
Tssr59905 6 17171579 to 17171621 42 - TSS region transcription start site region 59905
D830026I12Rik 6 17197751 to 17205695 7944 + lincRNA gene RIKEN cDNA D830026I12 gene
Tssr55026 6 17198101 to 17198110 9 + TSS region transcription start site region 55026
Tssr55027 6 17206030 to 17206031 1 + TSS region transcription start site region 55027
Gm15581 6 17206823 to 17385604 178781 - antisense lncRNA gene predicted gene 15581
Cpgi17173 6 17280862 to 17281594 732 CpG island CpG island 17173
Cav2 6 17281185 to 17289115 7930 + protein coding gene caveolin 2
Tssr55028 6 17281191 to 17281204 13 + TSS region transcription start site region 55028
Tssr55029 6 17281216 to 17281227 11 + TSS region transcription start site region 55029
Tssr55030 6 17281277 to 17281286 9 + TSS region transcription start site region 55030
Tssr55031 6 17281304 to 17281364 60 + TSS region transcription start site region 55031