Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 6:15684892-17254908

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85 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr54998 6 15720487 to 15720511 24 + TSS region transcription start site region 54998
Cpgi17171 6 15720493 to 15721508 1015 CpG island CpG island 17171
Tssr54999 6 15720654 to 15720747 93 + TSS region transcription start site region 54999
Mdfic 6 15720661 to 15802169 81508 + protein coding gene MyoD family inhibitor domain containing
Tssr55000 6 15720755 to 15720767 12 + TSS region transcription start site region 55000
Tssr55001 6 15720794 to 15720803 9 + TSS region transcription start site region 55001
Tssr55002 6 15720824 to 15720847 23 + TSS region transcription start site region 55002
Tssr55003 6 15720994 to 15720999 5 + TSS region transcription start site region 55003
Tssr55004 6 15721103 to 15721197 94 + TSS region transcription start site region 55004
Tssr55005 6 15725878 to 15725899 21 + TSS region transcription start site region 55005
Tssr55006 6 15727216 to 15727231 15 + TSS region transcription start site region 55006
Tssr55007 6 15727809 to 15727814 5 + TSS region transcription start site region 55007
Tssr55008 6 15728100 to 15728145 45 + TSS region transcription start site region 55008
Tssr59874 6 15728147 to 15728149 2 - TSS region transcription start site region 59874
Tssr59875 6 15728176 to 15728187 11 - TSS region transcription start site region 59875
Tssr59876 6 15728191 to 15728205 14 - TSS region transcription start site region 59876
Tssr59877 6 15731958 to 15731988 30 - TSS region transcription start site region 59877
Tssr1783 6 15745301 to 15745303 2 - TSS region transcription start site region 1783
Tssr55009 6 15749548 to 15749565 17 + TSS region transcription start site region 55009
Tssr55010 6 15755682 to 15755686 4 + TSS region transcription start site region 55010
Tssr55011 6 15755769 to 15755775 6 + TSS region transcription start site region 55011
Tssr59878 6 15758514 to 15758520 6 - TSS region transcription start site region 59878
Tssr55012 6 15779107 to 15779118 11 + TSS region transcription start site region 55012
Tssr55013 6 15779156 to 15779168 12 + TSS region transcription start site region 55013
Tssr55014 6 15782078 to 15782104 26 + TSS region transcription start site region 55014
Tssr55015 6 15785266 to 15785278 12 + TSS region transcription start site region 55015
Tssr59879 6 15793320 to 15793329 9 - TSS region transcription start site region 59879
Tssr55016 6 15793526 to 15793546 20 + TSS region transcription start site region 55016
Tssr55017 6 15793561 to 15793572 11 + TSS region transcription start site region 55017
Tssr55018 6 15794280 to 15794295 15 + TSS region transcription start site region 55018
Tssr55019 6 15794300 to 15794311 11 + TSS region transcription start site region 55019
Tssr55020 6 15794441 to 15794459 18 + TSS region transcription start site region 55020
Tssr55021 6 15799473 to 15799490 17 + TSS region transcription start site region 55021
Tssr55022 6 15800969 to 15800977 8 + TSS region transcription start site region 55022
Gm43924 6 15811323 to 15813058 1735 + unclassified gene predicted gene, 43924
Tssr55023 6 15824980 to 15824989 9 + TSS region transcription start site region 55023
Gm43990 6 15836089 to 15837779 1690 + unclassified gene predicted gene, 43990
Tssr59880 6 15836627 to 15836673 46 - TSS region transcription start site region 59880
Tssr59881 6 15845990 to 15846001 11 - TSS region transcription start site region 59881
Tssr59882 6 15846025 to 15846041 16 - TSS region transcription start site region 59882
Tssr59883 6 15846078 to 15846087 9 - TSS region transcription start site region 59883
Tssr59884 6 15846154 to 15846173 19 - TSS region transcription start site region 59884
Gm43991 6 16089686 to 16089959 273 - pseudogene predicted gene, 43991
D6Mit221.1 6 16172769 to 16172878 109 DNA segment DNA segment, Chr 6, Massachusetts Institute of Technology 221.1
D6Mit221 6 16172800 to 16172946 146 DNA segment DNA segment, Chr 6, Massachusetts Institute of Technology 221
Gm43993 6 16233244 to 16233490 246 - pseudogene predicted gene, 43993
Gm3148 6 16237627 to 16238238 611 + pseudogene predicted gene 3148
Gm36406 6 16457390 to 16469950 12560 - lncRNA gene predicted gene, 36406
Tssr59885 6 16469892 to 16469908 16 - TSS region transcription start site region 59885
Gm36503 6 16550387 to 16579873 29486 + lincRNA gene predicted gene, 36503
D6Mit264 6 16668914 to 16669037 123 DNA segment DNA segment, Chr 6, Massachusetts Institute of Technology 264
Gm36669 6 16777524 to 16788512 10988 + lincRNA gene predicted gene, 36669
Tfec 6 16833373 to 16898441 65068 - protein coding gene transcription factor EC
Tssr59886 6 16836724 to 16836733 9 - TSS region transcription start site region 59886
Tssr59887 6 16836862 to 16836888 26 - TSS region transcription start site region 59887
Tssr59888 6 16836978 to 16837005 27 - TSS region transcription start site region 59888
Tssr59889 6 16837039 to 16837058 19 - TSS region transcription start site region 59889
Tssr59890 6 16837084 to 16837117 33 - TSS region transcription start site region 59890
Tssr59891 6 16837214 to 16837231 17 - TSS region transcription start site region 59891
Tssr59892 6 16837603 to 16837617 14 - TSS region transcription start site region 59892
Tssr59893 6 16846281 to 16846305 24 - TSS region transcription start site region 59893
Tssr59894 6 16852355 to 16852367 12 - TSS region transcription start site region 59894
Tssr59895 6 16855948 to 16856002 54 - TSS region transcription start site region 59895
Tssr59896 6 16884018 to 16884029 11 - TSS region transcription start site region 59896
Tssr59897 6 16898309 to 16898318 9 - TSS region transcription start site region 59897
Tssr59898 6 16898347 to 16898391 44 - TSS region transcription start site region 59898
Tssr59899 6 16898395 to 16898416 21 - TSS region transcription start site region 59899
Tssr59900 6 16898418 to 16898436 18 - TSS region transcription start site region 59900
Tssr59901 6 16898443 to 16898459 16 - TSS region transcription start site region 59901
Tssr59902 6 16898460 to 16898471 11 - TSS region transcription start site region 59902
Gm5721 6 16925231 to 16926919 1688 + pseudogene predicted gene 5721
Gm15473 6 17058806 to 17064996 6190 - lincRNA gene predicted gene 15473
Cpgi17172 6 17064841 to 17065782 941 CpG island CpG island 17172
Tssr55024 6 17065129 to 17065233 104 + TSS region transcription start site region 55024
Tes 6 17065149 to 17105825 40676 + protein coding gene testis derived transcript
Tssr59903 6 17065464 to 17065509 45 - TSS region transcription start site region 59903
Gm4876 6 17086610 to 17094502 7892 - antisense lncRNA gene predicted gene 4876
D6Mit347 6 17095940 to 17096059 119 DNA segment DNA segment, Chr 6, Massachusetts Institute of Technology 347
Tssr55025 6 17105329 to 17105377 48 + TSS region transcription start site region 55025
Tssr59904 6 17171567 to 17171578 11 - TSS region transcription start site region 59904
Tssr59905 6 17171579 to 17171621 42 - TSS region transcription start site region 59905
D830026I12Rik 6 17197751 to 17205695 7944 + lincRNA gene RIKEN cDNA D830026I12 gene
Tssr55026 6 17198101 to 17198110 9 + TSS region transcription start site region 55026
Tssr55027 6 17206030 to 17206031 1 + TSS region transcription start site region 55027
Gm15581 6 17206823 to 17385604 178781 - antisense lncRNA gene predicted gene 15581