Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 6:15241078-16451087

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62 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Foxp2 6 14901349 to 15441977 540628 + protein coding gene forkhead box P2
D6Ertd588e 6 15249506 to 15249715 209 DNA segment DNA segment, Chr 6, ERATO Doi 588, expressed
D6Mit305 6 15311624 to 15311713 89 DNA segment DNA Segment, Chr 6, Massachusetts Institute of Technology 305
D6Mit305.2 6 15311720 to 15311862 142 DNA segment DNA segment, Chr 6, Massachusetts Institute of Technology 305.2
Tssr54994 6 15326873 to 15326922 49 + TSS region transcription start site region 54994
Tssr54995 6 15364486 to 15364495 9 + TSS region transcription start site region 54995
Tssr54996 6 15365212 to 15365216 4 + TSS region transcription start site region 54996
Cpgi17169 6 15379515 to 15379699 184 CpG island CpG island 17169
Tssr54997 6 15394722 to 15394734 12 + TSS region transcription start site region 54997
Gm25470 6 15404981 to 15405091 110 + miRNA gene predicted gene, 25470
D6Mit168 6 15449879 to 15450061 182 DNA segment DNA segment, Chr 6, Massachusetts Institute of Technology 168
Cpgi17170 6 15527161 to 15527480 319 CpG island CpG island 17170
Gm44039 6 15636124 to 15638369 2245 + unclassified gene predicted gene, 44039
Gm36352 6 15638126 to 15639757 1631 - lncRNA gene predicted gene, 36352
Tssr59873 6 15683450 to 15683456 6 - TSS region transcription start site region 59873
Tssr54998 6 15720487 to 15720511 24 + TSS region transcription start site region 54998
Cpgi17171 6 15720493 to 15721508 1015 CpG island CpG island 17171
Tssr54999 6 15720654 to 15720747 93 + TSS region transcription start site region 54999
Mdfic 6 15720661 to 15802169 81508 + protein coding gene MyoD family inhibitor domain containing
Tssr55000 6 15720755 to 15720767 12 + TSS region transcription start site region 55000
Tssr55001 6 15720794 to 15720803 9 + TSS region transcription start site region 55001
Tssr55002 6 15720824 to 15720847 23 + TSS region transcription start site region 55002
Tssr55003 6 15720994 to 15720999 5 + TSS region transcription start site region 55003
Tssr55004 6 15721103 to 15721197 94 + TSS region transcription start site region 55004
Tssr55005 6 15725878 to 15725899 21 + TSS region transcription start site region 55005
Tssr55006 6 15727216 to 15727231 15 + TSS region transcription start site region 55006
Tssr55007 6 15727809 to 15727814 5 + TSS region transcription start site region 55007
Tssr55008 6 15728100 to 15728145 45 + TSS region transcription start site region 55008
Tssr59874 6 15728147 to 15728149 2 - TSS region transcription start site region 59874
Tssr59875 6 15728176 to 15728187 11 - TSS region transcription start site region 59875
Tssr59876 6 15728191 to 15728205 14 - TSS region transcription start site region 59876
Tssr59877 6 15731958 to 15731988 30 - TSS region transcription start site region 59877
Tssr1783 6 15745301 to 15745303 2 - TSS region transcription start site region 1783
Tssr55009 6 15749548 to 15749565 17 + TSS region transcription start site region 55009
Tssr55010 6 15755682 to 15755686 4 + TSS region transcription start site region 55010
Tssr55011 6 15755769 to 15755775 6 + TSS region transcription start site region 55011
Tssr59878 6 15758514 to 15758520 6 - TSS region transcription start site region 59878
Tssr55012 6 15779107 to 15779118 11 + TSS region transcription start site region 55012
Tssr55013 6 15779156 to 15779168 12 + TSS region transcription start site region 55013
Tssr55014 6 15782078 to 15782104 26 + TSS region transcription start site region 55014
Tssr55015 6 15785266 to 15785278 12 + TSS region transcription start site region 55015
Tssr59879 6 15793320 to 15793329 9 - TSS region transcription start site region 59879
Tssr55016 6 15793526 to 15793546 20 + TSS region transcription start site region 55016
Tssr55017 6 15793561 to 15793572 11 + TSS region transcription start site region 55017
Tssr55018 6 15794280 to 15794295 15 + TSS region transcription start site region 55018
Tssr55019 6 15794300 to 15794311 11 + TSS region transcription start site region 55019
Tssr55020 6 15794441 to 15794459 18 + TSS region transcription start site region 55020
Tssr55021 6 15799473 to 15799490 17 + TSS region transcription start site region 55021
Tssr55022 6 15800969 to 15800977 8 + TSS region transcription start site region 55022
Gm43924 6 15811323 to 15813058 1735 + unclassified gene predicted gene, 43924
Tssr55023 6 15824980 to 15824989 9 + TSS region transcription start site region 55023
Gm43990 6 15836089 to 15837779 1690 + unclassified gene predicted gene, 43990
Tssr59880 6 15836627 to 15836673 46 - TSS region transcription start site region 59880
Tssr59881 6 15845990 to 15846001 11 - TSS region transcription start site region 59881
Tssr59882 6 15846025 to 15846041 16 - TSS region transcription start site region 59882
Tssr59883 6 15846078 to 15846087 9 - TSS region transcription start site region 59883
Tssr59884 6 15846154 to 15846173 19 - TSS region transcription start site region 59884
Gm43991 6 16089686 to 16089959 273 - pseudogene predicted gene, 43991
D6Mit221.1 6 16172769 to 16172878 109 DNA segment DNA segment, Chr 6, Massachusetts Institute of Technology 221.1
D6Mit221 6 16172800 to 16172946 146 DNA segment DNA segment, Chr 6, Massachusetts Institute of Technology 221
Gm43993 6 16233244 to 16233490 246 - pseudogene predicted gene, 43993
Gm3148 6 16237627 to 16238238 611 + pseudogene predicted gene 3148