Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 6:147075871-148032613

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48 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Mansc4 6 147075062 to 147087032 11970 - protein coding gene MANSC domain containing 4
Cpgi18175 6 147086783 to 147086972 189 CpG island CpG island 18175
Tssr64136 6 147087023 to 147087037 14 - TSS region transcription start site region 64136
A330079N23Rik 6 147089309 to 147091849 2540 unclassified gene RIKEN cDNA A330079N23 gene
Cpgi18176 6 147090821 to 147092493 1672 CpG island CpG island 18176
Klhl42 6 147091379 to 147112778 21399 + protein coding gene kelch-like 42
Tssr59612 6 147091483 to 147091528 45 + TSS region transcription start site region 59612
Tssr59613 6 147096550 to 147096555 5 + TSS region transcription start site region 59613
Tssr59614 6 147099552 to 147099578 26 + TSS region transcription start site region 59614
Tssr59615 6 147111951 to 147111959 8 + TSS region transcription start site region 59615
Gm7571 6 147173481 to 147175116 1635 + pseudogene predicted gene 7571
E330012B07Rik 6 147180244 to 147208285 28041 + lincRNA gene RIKEN cDNA E330012B07 gene
Cpgi18177 6 147232821 to 147232982 161 CpG island CpG island 18177
Gm15767 6 147242527 to 147243801 1274 - lincRNA gene predicted gene 15767
Tssr64137 6 147243784 to 147243793 9 - TSS region transcription start site region 64137
Tssr64138 6 147243794 to 147243806 12 - TSS region transcription start site region 64138
Tssr64139 6 147243814 to 147243836 22 - TSS region transcription start site region 64139
Pthlh 6 147252109 to 147264013 11904 - protein coding gene parathyroid hormone-like peptide
Tssr59616 6 147257081 to 147257088 7 + TSS region transcription start site region 59616
Tssr59617 6 147257155 to 147257161 6 + TSS region transcription start site region 59617
Cpgi18178 6 147263177 to 147264552 1375 CpG island CpG island 18178
Tssr64140 6 147263858 to 147263874 16 - TSS region transcription start site region 64140
Tssr64141 6 147263933 to 147263940 7 - TSS region transcription start site region 64141
Tssr64142 6 147263963 to 147263977 14 - TSS region transcription start site region 64142
Tssr64143 6 147263982 to 147264028 46 - TSS region transcription start site region 64143
Tssr59618 6 147264098 to 147264103 5 + TSS region transcription start site region 59618
Tssr64144 6 147264124 to 147264152 28 - TSS region transcription start site region 64144
Ltq3 6 147264666 to 147264871 205 QTL lung tumor QTL 3
D6Mit26 6 147264666 to 147264871 205 DNA segment DNA segment, Chr 6, Massachusetts Institute of Technology 26
Cpgi18179 6 147268499 to 147268706 207 CpG island CpG island 18179
Gm15766 6 147271837 to 147272649 812 + pseudogene predicted gene 15766
Tssr64145 6 147389786 to 147389817 31 - TSS region transcription start site region 64145
Gm6288 6 147438169 to 147475791 37622 - antisense lncRNA gene predicted gene 6288
D6Mit304 6 147439405 to 147439523 118 DNA segment DNA segment, Chr 6, Massachusetts Institute of Technology 304
Cpgi18180 6 147475746 to 147476808 1062 CpG island CpG island 18180
Tssr59619 6 147475865 to 147475922 57 + TSS region transcription start site region 59619
Ccdc91 6 147475871 to 147632613 156742 + protein coding gene coiled-coil domain containing 91
4933406L23Rik 6 147529801 to 147531309 1508 - unclassified gene RIKEN cDNA 4933406L23 gene
Tssr64146 6 147531275 to 147531285 10 - TSS region transcription start site region 64146
Tssr64147 6 147531290 to 147531299 9 - TSS region transcription start site region 64147
Tssr59620 6 147531367 to 147531383 16 + TSS region transcription start site region 59620
Tssr59621 6 147531392 to 147531438 46 + TSS region transcription start site region 59621
Tssr59622 6 147531440 to 147531450 10 + TSS region transcription start site region 59622
Tssr64148 6 147675705 to 147675710 5 - TSS region transcription start site region 64148
Tssr64149 6 147675736 to 147675763 27 - TSS region transcription start site region 64149
1700049E15Rik 6 147690241 to 147702374 12133 + lincRNA gene RIKEN cDNA 1700049E15 gene
Gm15762 6 147709982 to 147719451 9469 - lincRNA gene predicted gene 15762
Far2os2 6 148006580 to 148047339 40759 - antisense lncRNA gene fatty acyl CoA reductase 2, opposite strand 2