Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 6:146700104-147021406

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35 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi18170 6 146724614 to 146725760 1146 CpG island CpG island 18170
Tssr59588 6 146724957 to 146724998 41 + TSS region transcription start site region 59588
Stk38l 6 146724995 to 146778812 53817 + protein coding gene serine/threonine kinase 38 like
Tssr59589 6 146725005 to 146725027 22 + TSS region transcription start site region 59589
Tssr59590 6 146752340 to 146752359 19 + TSS region transcription start site region 59590
Tssr59591 6 146757031 to 146757046 15 + TSS region transcription start site region 59591
Gm44270 6 146762581 to 146763814 1233 + unclassified gene predicted gene, 44270
Tssr59592 6 146782445 to 146782446 1 + TSS region transcription start site region 59592
Gm6266 6 146782469 to 146783274 805 + pseudogene predicted gene 6266
Cpgi18171 6 146795766 to 146796411 645 CpG island CpG island 18171
Tssr59593 6 146796041 to 146796072 31 + TSS region transcription start site region 59593
Arntl2 6 146796055 to 146833529 37474 + protein coding gene aryl hydrocarbon receptor nuclear translocator-like 2
Tssr59594 6 146796073 to 146796091 18 + TSS region transcription start site region 59594
4930447C11Rik 6 146846276 to 146847203 927 - unclassified gene RIKEN cDNA 4930447C11 gene
Tssr59595 6 146850100 to 146850109 9 + TSS region transcription start site region 59595
Smco2 6 146850104 to 146871406 21302 + protein coding gene single-pass membrane protein with coiled-coil domains 2
Tssr59596 6 146850120 to 146850159 39 + TSS region transcription start site region 59596
Tssr2061 6 146850169 to 146850175 6 + TSS region transcription start site region 2061
Tssr59597 6 146861798 to 146861805 7 + TSS region transcription start site region 59597
Tssr59598 6 146861956 to 146861963 7 + TSS region transcription start site region 59598
Tssr59599 6 146861992 to 146861999 7 + TSS region transcription start site region 59599
Cpgi18172 6 146870986 to 146871255 269 CpG island CpG island 18172
Cpgi18173 6 146888026 to 146889148 1122 CpG island CpG island 18173
Tssr59600 6 146888481 to 146888588 107 + TSS region transcription start site region 59600
Ppfibp1 6 146888487 to 147032025 143538 + protein coding gene PTPRF interacting protein, binding protein 1 (liprin beta 1)
Tssr59601 6 146888593 to 146888605 12 + TSS region transcription start site region 59601
Tssr59602 6 146888632 to 146888654 22 + TSS region transcription start site region 59602
Tssr59603 6 146932899 to 146932909 10 + TSS region transcription start site region 59603
Tssr59604 6 146933387 to 146933419 32 + TSS region transcription start site region 59604
Tssr59605 6 146933448 to 146933454 6 + TSS region transcription start site region 59605
1700034J05Rik 6 146950329 to 146954422 4093 - protein coding gene RIKEN cDNA 1700034J05 gene
Tssr64132 6 146954383 to 146954396 13 - TSS region transcription start site region 64132
Tssr64133 6 146954399 to 146954431 32 - TSS region transcription start site region 64133
Tssr64134 6 146954435 to 146954440 5 - TSS region transcription start site region 64134
Gm44085 6 146992367 to 146994024 1657 - antisense lncRNA gene predicted gene, 44085