Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 6:146467534-146687550

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51 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Itpr2 6 146108299 to 146502223 393924 - protein coding gene inositol 1,4,5-triphosphate receptor 2
Tssr64114 6 146470717 to 146470721 4 - TSS region transcription start site region 64114
Tssr64115 6 146476001 to 146476044 43 - TSS region transcription start site region 64115
Cpgi18166 6 146501417 to 146502747 1330 CpG island CpG island 18166
Tssr59572 6 146501644 to 146501656 12 + TSS region transcription start site region 59572
Tssr59573 6 146501705 to 146501723 18 + TSS region transcription start site region 59573
Tssr64116 6 146501994 to 146502033 39 - TSS region transcription start site region 64116
Tssr64117 6 146502039 to 146502060 21 - TSS region transcription start site region 64117
Tssr64118 6 146502111 to 146502133 22 - TSS region transcription start site region 64118
Tssr64119 6 146502141 to 146502230 89 - TSS region transcription start site region 64119
Tssr59574 6 146502310 to 146502332 22 + TSS region transcription start site region 59574
Tssr64120 6 146515904 to 146515911 7 - TSS region transcription start site region 64120
Ints13 6 146549632 to 146577835 28203 - protein coding gene integrator complex subunit 13
Cpgi18167 6 146577106 to 146578434 1328 CpG island CpG island 18167
Tssr64121 6 146577399 to 146577427 28 - TSS region transcription start site region 64121
Tssr64122 6 146577430 to 146577472 42 - TSS region transcription start site region 64122
Tssr59575 6 146577512 to 146577531 19 + TSS region transcription start site region 59575
Tssr59576 6 146577534 to 146577550 16 + TSS region transcription start site region 59576
Tssr64123 6 146577588 to 146577592 4 - TSS region transcription start site region 64123
Tssr59577 6 146577606 to 146577623 17 + TSS region transcription start site region 59577
Fgfr1op2 6 146577635 to 146599198 21563 + protein coding gene FGFR1 oncogene partner 2
Tssr64124 6 146577756 to 146577799 43 - TSS region transcription start site region 64124
Tssr64125 6 146577808 to 146577824 16 - TSS region transcription start site region 64125
Tssr64126 6 146577825 to 146577839 14 - TSS region transcription start site region 64126
Tssr59578 6 146577897 to 146577948 51 + TSS region transcription start site region 59578
Tssr59579 6 146577952 to 146577970 18 + TSS region transcription start site region 59579
Tssr59580 6 146585681 to 146585720 39 + TSS region transcription start site region 59580
Tssr59581 6 146589133 to 146589146 13 + TSS region transcription start site region 59581
Tm7sf3 6 146602276 to 146634592 32316 - protein coding gene transmembrane 7 superfamily member 3
Insq8 6 146633481 to 146633626 145 QTL insulin QTL 8
D6Mit201 6 146633481 to 146633626 145 DNA segment DNA segment, Chr 6, Massachusetts Institute of Technology 201
D6Mit201.2 6 146633605 to 146633715 110 DNA segment DNA segment, Chr 6, Massachusetts Institute of Technology 201.2
W6q5 6 146633626 to 96655951 -49977675 QTL weight 6 weeks QTL 5
Tesq2 6 146633626 to 96655951 -49977675 QTL testis weight QTL 2
Egq11 6 146633626 to 96655951 -49977675 QTL early growth QTL 11
Cpgi18168 6 146633774 to 146634729 955 CpG island CpG island 18168
Tssr59582 6 146633834 to 146633878 44 + TSS region transcription start site region 59582
Tssr64127 6 146634453 to 146634493 40 - TSS region transcription start site region 64127
Tssr64128 6 146634507 to 146634518 11 - TSS region transcription start site region 64128
Tssr64129 6 146634527 to 146634580 53 - TSS region transcription start site region 64129
Tssr64130 6 146634588 to 146634611 23 - TSS region transcription start site region 64130
Tssr59583 6 146640290 to 146640293 3 + TSS region transcription start site region 59583
Cpgi18169 6 146642247 to 146643205 958 CpG island CpG island 18169
Tssr59584 6 146642572 to 146642596 24 + TSS region transcription start site region 59584
Med21 6 146642579 to 146650600 8021 + protein coding gene mediator complex subunit 21
Tssr59585 6 146642605 to 146642616 11 + TSS region transcription start site region 59585
Gm6654 6 146647241 to 146647588 347 - pseudogene predicted pseudogene 6654
Tssr64131 6 146647611 to 146647613 2 - TSS region transcription start site region 64131
Tssr59586 6 146657210 to 146657218 8 + TSS region transcription start site region 59586
4930479D17Rik 6 146657218 to 146665403 8185 + lincRNA gene RIKEN cDNA 4930479D17 gene
Tssr59587 6 146657222 to 146657230 8 + TSS region transcription start site region 59587