Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 6:145320410-145760609

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52 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Mvwf2 6 114368732 to 145656013 31287281 QTL modifier of von Willebrand factor 2
Pas17 6 124357314 to 145656013 21298699 QTL pulmonary adenoma susceptibility 17
Shm5 6 132289569 to 145656013 13366444 QTL sperm head morphology 5
Cpgi18159 6 145340082 to 145341621 1539 CpG island CpG island 18159
Tssr64059 6 145340091 to 145340108 17 - TSS region transcription start site region 64059
Tssr59545 6 145340282 to 145340296 14 + TSS region transcription start site region 59545
Tssr64060 6 145340673 to 145340687 14 - TSS region transcription start site region 64060
Tssr64061 6 145340700 to 145340719 19 - TSS region transcription start site region 64061
Tssr64062 6 145340778 to 145340799 21 - TSS region transcription start site region 64062
Tssr59546 6 145341014 to 145341035 21 + TSS region transcription start site region 59546
Tssr2059 6 145341464 to 145341470 6 + TSS region transcription start site region 2059
Tssr59547 6 145341481 to 145341494 13 + TSS region transcription start site region 59547
Tssr64063 6 145341754 to 145341779 25 - TSS region transcription start site region 64063
Tssr64064 6 145341874 to 145341909 35 - TSS region transcription start site region 64064
Gm38926 6 145347865 to 145348405 540 - lncRNA gene predicted gene, 38926
Gm23498 6 145366858 to 145366944 86 + snoRNA gene predicted gene, 23498
Tssr59548 6 145387593 to 145387601 8 + TSS region transcription start site region 59548
Tssr59549 6 145387603 to 145387621 18 + TSS region transcription start site region 59549
1700073E17Rik 6 145387625 to 145392224 4599 + pseudogene RIKEN cDNA 1700073E17 gene
Lmntd1 6 145387885 to 145450773 62888 - protein coding gene lamin tail domain containing 1
Tssr64065 6 145433993 to 145434013 20 - TSS region transcription start site region 64065
Tssr64066 6 145434046 to 145434054 8 - TSS region transcription start site region 64066
Tssr64067 6 145434059 to 145434071 12 - TSS region transcription start site region 64067
Tssr64068 6 145434079 to 145434090 11 - TSS region transcription start site region 64068
Tssr64069 6 145434932 to 145434953 21 - TSS region transcription start site region 64069
Gm15499 6 145441756 to 145444028 2272 + antisense lncRNA gene predicted gene 15499
Tssr64070 6 145450753 to 145450767 14 - TSS region transcription start site region 64070
Gm38475 6 145453345 to 145614319 160974 - lncRNA gene predicted gene, 38475
Gm25373 6 145464189 to 145464303 114 + snoRNA gene predicted gene, 25373
D6Ertd469e 6 145540410 to 145540609 199 DNA segment DNA segment, Chr 6, ERATO Doi 469, expressed
Tssr64071 6 145614277 to 145614291 14 - TSS region transcription start site region 64071
Cpgi18160 6 145615724 to 145616196 472 CpG island CpG island 18160
Tssr59550 6 145615757 to 145615772 15 + TSS region transcription start site region 59550
Tuba3b 6 145615963 to 145621477 5514 + protein coding gene tubulin, alpha 3B
Tssr2060 6 145615987 to 145615994 7 + TSS region transcription start site region 2060
Tssr59551 6 145616009 to 145616026 17 + TSS region transcription start site region 59551
Tssr59552 6 145616036 to 145616041 5 + TSS region transcription start site region 59552
D6Mit14 6 145655856 to 145656013 157 DNA segment DNA segment, Chr 6, Massachusetts Institute of Technology 14
Lith25 6 145655856 to 145656013 157 QTL lithogenic gene 25
Hdlq12 6 145655856 to 145656013 157 QTL HDL QTL 12
Sle23 6 145655856 to 145656013 157 QTL systematic lupus erythematosus susceptibility 23
Sndy1 6 145656013 to 50864934 -94791079 heritable phenotypic marker syndactyly 1
D6Mit14.1 6 145656046 to 145656206 160 DNA segment DNA segment, Chr 6, Massachusetts Institute of Technology 14.1
D6Mit303 6 145682808 to 145682949 141 DNA segment DNA segment, Chr 6, Massachusetts Institute of Technology 303
Gm15704 6 145738693 to 145746273 7580 - lincRNA gene predicted gene 15704
Cpgi18161 6 145746101 to 145747529 1428 CpG island CpG island 18161
Tssr64072 6 145746270 to 145746274 4 - TSS region transcription start site region 64072
Tssr59553 6 145746585 to 145746606 21 + TSS region transcription start site region 59553
Tssr59554 6 145746739 to 145746767 28 + TSS region transcription start site region 59554
Rassf8 6 145746748 to 145821079 74331 + protein coding gene Ras association (RalGDS/AF-6) domain family (N-terminal) member 8
Tssr59555 6 145746779 to 145746808 29 + TSS region transcription start site region 59555
Tssr59556 6 145746839 to 145746869 30 + TSS region transcription start site region 59556