Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 6:145074872-145311017

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64 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Bcat1 6 144993835 to 145076157 82322 - protein coding gene branched chain aminotransferase 1, cytosolic
Cpgi18153 6 145075097 to 145076166 1069 CpG island CpG island 18153
Tssr59520 6 145075339 to 145075342 3 + TSS region transcription start site region 59520
Tssr59521 6 145075398 to 145075416 18 + TSS region transcription start site region 59521
Tssr64046 6 145075938 to 145075954 16 - TSS region transcription start site region 64046
Tssr64047 6 145075960 to 145076018 58 - TSS region transcription start site region 64047
Tssr64048 6 145076032 to 145076061 29 - TSS region transcription start site region 64048
Tssr64049 6 145076066 to 145076088 22 - TSS region transcription start site region 64049
Tssr64050 6 145076090 to 145076103 13 - TSS region transcription start site region 64050
Tssr64051 6 145076106 to 145076107 1 - TSS region transcription start site region 64051
Tssr59522 6 145115616 to 145115658 42 + TSS region transcription start site region 59522
Lrmp 6 145115653 to 145174934 59281 + protein coding gene lymphoid-restricted membrane protein
Tssr59523 6 145121134 to 145121146 12 + TSS region transcription start site region 59523
Tssr59524 6 145121157 to 145121168 11 + TSS region transcription start site region 59524
Tssr59525 6 145121711 to 145121722 11 + TSS region transcription start site region 59525
Tssr59526 6 145121727 to 145121748 21 + TSS region transcription start site region 59526
Tssr59527 6 145121762 to 145121795 33 + TSS region transcription start site region 59527
Tssr59528 6 145121838 to 145121846 8 + TSS region transcription start site region 59528
Tssr59529 6 145121855 to 145121861 6 + TSS region transcription start site region 59529
Tssr59530 6 145121867 to 145121878 11 + TSS region transcription start site region 59530
Tssr59531 6 145121887 to 145121906 19 + TSS region transcription start site region 59531
Tssr59532 6 145121941 to 145121953 12 + TSS region transcription start site region 59532
Tssr64052 6 145122714 to 145122741 27 - TSS region transcription start site region 64052
Tssr59533 6 145123483 to 145123485 2 + TSS region transcription start site region 59533
Tssr59534 6 145126631 to 145126643 12 + TSS region transcription start site region 59534
Gm43910 6 145142157 to 145145397 3240 - unclassified gene predicted gene, 43910
Tssr59535 6 145145473 to 145145483 10 + TSS region transcription start site region 59535
Tssr59536 6 145160897 to 145160909 12 + TSS region transcription start site region 59536
Tssr59537 6 145163126 to 145163130 4 + TSS region transcription start site region 59537
Casc1 6 145174872 to 145211017 36145 - protein coding gene cancer susceptibility candidate 1
Tssr59538 6 145182261 to 145182308 47 + TSS region transcription start site region 59538
Gm15543 6 145182275 to 145187630 5355 + antisense lncRNA gene predicted gene 15543
Tssr59539 6 145182317 to 145182328 11 + TSS region transcription start site region 59539
Cpgi18154 6 145187433 to 145187771 338 CpG island CpG island 18154
Cpgi18155 6 145210679 to 145211549 870 CpG island CpG island 18155
Tssr64053 6 145210835 to 145210894 59 - TSS region transcription start site region 64053
Etfrf1 6 145211134 to 145216542 5408 + protein coding gene electron transfer flavoprotein regulatory factor 1
Tssr59540 6 145211141 to 145211222 81 + TSS region transcription start site region 59540
Tssr59541 6 145211229 to 145211240 11 + TSS region transcription start site region 59541
Tssr59542 6 145212525 to 145212529 4 + TSS region transcription start site region 59542
Pas18 6 145216699 to 145250239 33540 QTL pulmonary adenoma susceptibility 18
Kras 6 145216699 to 145250239 33540 - protein coding gene Kirsten rat sarcoma viral oncogene homolog
Ncilt 6 145216699 to 145250239 33540 QTL nuclear cytoplasmic invaginations in lung tumors
Tssr2056 6 145229435 to 145229442 7 - TSS region transcription start site region 2056
Pas15 6 145235142 to 145235338 196 QTL pulmonary adenoma susceptibility 15
D6Mit57 6 145235142 to 145235338 196 DNA segment DNA segment, Chr 6, Massachusetts Institute of Technology 57
Gm44164 6 145238667 to 145241227 2560 - unclassified gene predicted gene, 44164
Tssr59543 6 145240465 to 145240471 6 + TSS region transcription start site region 59543
Cpgi18156 6 145249239 to 145251126 1887 CpG island CpG island 18156
Tssr64054 6 145250177 to 145250259 82 - TSS region transcription start site region 64054
Tssr64055 6 145250386 to 145250397 11 - TSS region transcription start site region 64055
Gm15706 6 145250552 to 145251856 1304 + lincRNA gene predicted gene 15706
Rps25-ps1 6 145266400 to 145266777 377 + pseudogene ribosomal protein S25, pseudogene 1
Tssr64056 6 145267860 to 145267864 4 - TSS region transcription start site region 64056
Cpgi18157 6 145276237 to 145276561 324 CpG island CpG island 18157
Tssr2057 6 145276305 to 145276320 15 - TSS region transcription start site region 2057
Gm22793 6 145287928 to 145288257 329 - unclassified non-coding RNA gene predicted gene, 22793
Tssr64057 6 145288243 to 145288260 17 - TSS region transcription start site region 64057
2010013B24Rik 6 145303152 to 145308951 5799 + lincRNA gene RIKEN cDNA 2010013B24 gene
Cpgi18158 6 145303667 to 145303941 274 CpG island CpG island 18158
Gm44428 6 145304310 to 145305183 873 + unclassified gene predicted gene, 44428
Tssr64058 6 145306651 to 145306653 2 - TSS region transcription start site region 64058
Tssr59544 6 145307049 to 145307050 1 + TSS region transcription start site region 59544
Tssr2058 6 145307330 to 145307334 4 - TSS region transcription start site region 2058