MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 6:144532890-144812900

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16 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Sox5	6	143828425 to 144781977	953552	-	protein coding gene	SRY (sex determining region Y)-box 5
Tssr64021	6	144630524 to 144630536	12	-	TSS region	transcription start site region 64021
D6Mit114	6	144639629 to 144639726	97		DNA segment	DNA segment, Chr 6, Massachusetts Institute of Technology 114
Sox5it	6	144670427 to 144672720	2293	-	sense intronic lncRNA gene	SRY (sex determining region Y)-box 5, intronic transcript
Tssr59516	6	144672843 to 144672851	8	+	TSS region	transcription start site region 59516
Sox5os3	6	144672868 to 144693832	20964	+	antisense lncRNA gene	SRY (sex determining region Y)-box 5, opposite strand 3
Tssr59517	6	144672876 to 144672889	13	+	TSS region	transcription start site region 59517
Tssr59518	6	144672890 to 144672900	10	+	TSS region	transcription start site region 59518
Tssr64022	6	144685806 to 144685810	4	-	TSS region	transcription start site region 64022
Sox5os5	6	144723565 to 144724907	1342	+	antisense lncRNA gene	SRY (sex determining region Y)-box 5, opposite strand 5
Sox5os4	6	144758805 to 144760071	1266	+	antisense lncRNA gene	SRY (sex determining region Y)-box 5, opposite strand 4
Tssr64023	6	144779353 to 144779374	21	-	TSS region	transcription start site region 64023
Cpgi18151	6	144781437 to 144782841	1404		CpG island	CpG island 18151
Tssr64024	6	144781907 to 144781988	81	-	TSS region	transcription start site region 64024
Gm32069	6	144788449 to 144807187	18738	-	lncRNA gene	predicted gene, 32069
Gm22792	6	144803500 to 144803632	132	-	snoRNA gene	predicted gene, 22792