Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 6:143991225-144991416

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45 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Acigg2 6 125048587 to 144315227 19266640 QTL anti COL7 IgG1 antibody 2
Sox5 6 143828425 to 144781977 953552 - protein coding gene SRY (sex determining region Y)-box 5
Tssr2053 6 143992385 to 143992387 2 + TSS region transcription start site region 2053
Tssr64004 6 144020106 to 144020112 6 - TSS region transcription start site region 64004
Sox5os1 6 144021908 to 144023778 1870 + antisense lncRNA gene SRY (sex determining region Y)-box 5, opposite strand 1
Tssr64005 6 144097432 to 144097436 4 - TSS region transcription start site region 64005
Tssr64006 6 144099807 to 144099844 37 - TSS region transcription start site region 64006
Tssr64007 6 144204070 to 144204082 12 - TSS region transcription start site region 64007
Tssr64008 6 144204128 to 144204160 32 - TSS region transcription start site region 64008
Tssr64009 6 144204181 to 144204194 13 - TSS region transcription start site region 64009
Tssr64010 6 144209349 to 144209356 7 - TSS region transcription start site region 64010
Tssr64011 6 144209360 to 144209369 9 - TSS region transcription start site region 64011
Tssr64012 6 144209373 to 144209385 12 - TSS region transcription start site region 64012
Tssr64013 6 144209404 to 144209435 31 - TSS region transcription start site region 64013
Tssr64014 6 144209440 to 144209447 7 - TSS region transcription start site region 64014
Tssr64015 6 144209448 to 144209469 21 - TSS region transcription start site region 64015
Tssr64016 6 144209471 to 144209487 16 - TSS region transcription start site region 64016
Tssr64017 6 144209633 to 144209647 14 - TSS region transcription start site region 64017
Tssr64018 6 144209663 to 144209690 27 - TSS region transcription start site region 64018
Tssr64019 6 144209747 to 144209762 15 - TSS region transcription start site region 64019
Gm38531 6 144211110 to 144213327 2217 + lncRNA gene predicted gene, 38531
D6Jpk3 6 144254874 to 144255017 143 DNA segment DNA segment, Chr 6, Japan, Kominami 3
Tssr64020 6 144270900 to 144270902 2 - TSS region transcription start site region 64020
Sox5os2 6 144481225 to 144501416 20191 + antisense lncRNA gene SRY (sex determining region Y)-box 5, opposite strand 2
4930556H05Rik 6 144528700 to 144529166 466 unclassified gene RIKEN cDNA 4930556H05 gene
Tssr64021 6 144630524 to 144630536 12 - TSS region transcription start site region 64021
D6Mit114 6 144639629 to 144639726 97 DNA segment DNA segment, Chr 6, Massachusetts Institute of Technology 114
Sox5it 6 144670427 to 144672720 2293 - sense intronic lncRNA gene SRY (sex determining region Y)-box 5, intronic transcript
Tssr59516 6 144672843 to 144672851 8 + TSS region transcription start site region 59516
Sox5os3 6 144672868 to 144693832 20964 + antisense lncRNA gene SRY (sex determining region Y)-box 5, opposite strand 3
Tssr59517 6 144672876 to 144672889 13 + TSS region transcription start site region 59517
Tssr59518 6 144672890 to 144672900 10 + TSS region transcription start site region 59518
Tssr64022 6 144685806 to 144685810 4 - TSS region transcription start site region 64022
Sox5os5 6 144723565 to 144724907 1342 + antisense lncRNA gene SRY (sex determining region Y)-box 5, opposite strand 5
Sox5os4 6 144758805 to 144760071 1266 + antisense lncRNA gene SRY (sex determining region Y)-box 5, opposite strand 4
Tssr64023 6 144779353 to 144779374 21 - TSS region transcription start site region 64023
Cpgi18151 6 144781437 to 144782841 1404 CpG island CpG island 18151
Tssr64024 6 144781907 to 144781988 81 - TSS region transcription start site region 64024
Gm32069 6 144788449 to 144807187 18738 - lncRNA gene predicted gene, 32069
Gm22792 6 144803500 to 144803632 132 - snoRNA gene predicted gene, 22792
Gm20124 6 144822909 to 144876984 54075 - pseudogene predicted gene, 20124
Gm32124 6 144877167 to 144897121 19954 - lncRNA gene predicted gene, 32124
Tssr2054 6 144902098 to 144902106 8 + TSS region transcription start site region 2054
Gm46721 6 144940587 to 144945029 4442 - lncRNA gene predicted gene, 46721
Tssr64025 6 144984358 to 144984373 15 - TSS region transcription start site region 64025