Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 6:143342397-144029257

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29 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi18149 6 143394392 to 143394769 377 CpG island CpG island 18149
Tssr59510 6 143402118 to 143402132 14 + TSS region transcription start site region 59510
Tssr59511 6 143404629 to 143404668 39 + TSS region transcription start site region 59511
Tssr59512 6 143409682 to 143409683 1 + TSS region transcription start site region 59512
Gm31427 6 143451103 to 143453042 1939 - lncRNA gene predicted gene, 31427
Gm38923 6 143454191 to 143455767 1576 - lncRNA gene predicted gene, 38923
Gm23272 6 143465269 to 143465397 128 - snoRNA gene predicted gene, 23272
4930579D09Rik 6 143533965 to 143535508 1543 - lincRNA gene RIKEN cDNA 4930579D09 gene
Tssr63998 6 143535502 to 143535513 11 - TSS region transcription start site region 63998
1700060C16Rik 6 143593353 to 143651288 57935 - lincRNA gene RIKEN cDNA 1700060C16 gene
Idd6.2 6 143610925 to 146313558 2702633 QTL insulin dependent diabetes susceptibility 6.2
D6Mit113 6 143610925 to 143611052 127 DNA segment DNA segment, Chr 6, Massachusetts Institute of Technology 113
Tssr59513 6 143642819 to 143642825 6 + TSS region transcription start site region 59513
Gm31521 6 143682397 to 143689257 6860 + lncRNA gene predicted gene, 31521
Tssr63999 6 143757269 to 143757271 2 - TSS region transcription start site region 63999
Gm46720 6 143758337 to 143761423 3086 - lncRNA gene predicted gene, 46720
Sox5 6 143828425 to 144781977 953552 - protein coding gene SRY (sex determining region Y)-box 5
Cpgi18150 6 143833307 to 143833725 418 CpG island CpG island 18150
Gm32010 6 143833507 to 143883497 49990 + lncRNA gene predicted gene, 32010
Tssr64000 6 143909136 to 143909147 11 - TSS region transcription start site region 64000
Tssr64001 6 143925986 to 143925989 3 - TSS region transcription start site region 64001
Tssr64002 6 143947061 to 143947084 23 - TSS region transcription start site region 64002
Tssr64003 6 143947092 to 143947111 19 - TSS region transcription start site region 64003
Tssr59514 6 143947177 to 143947184 7 + TSS region transcription start site region 59514
Tssr59515 6 143955919 to 143955928 9 + TSS region transcription start site region 59515
Gm44068 6 143988740 to 143990867 2127 - unclassified gene predicted gene, 44068
Tssr2053 6 143992385 to 143992387 2 + TSS region transcription start site region 2053
Tssr64004 6 144020106 to 144020112 6 - TSS region transcription start site region 64004
Sox5os1 6 144021908 to 144023778 1870 + antisense lncRNA gene SRY (sex determining region Y)-box 5, opposite strand 1