Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 6:141445078-142385292

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71 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Pde3a 6 141249269 to 141506862 257593 + protein coding gene phosphodiesterase 3A, cGMP inhibited
Gm43958 6 141442360 to 141445903 3543 + unclassified gene predicted gene, 43958
Tssr59455 6 141454741 to 141454745 4 + TSS region transcription start site region 59455
Slco1c1 6 141524377 to 141570177 45800 + protein coding gene solute carrier organic anion transporter family, member 1c1
Tssr59456 6 141524379 to 141524449 70 + TSS region transcription start site region 59456
Tssr59457 6 141524568 to 141524586 18 + TSS region transcription start site region 59457
Tssr59458 6 141524589 to 141524629 40 + TSS region transcription start site region 59458
Tssr59459 6 141524658 to 141524672 14 + TSS region transcription start site region 59459
Tssr63930 6 141601146 to 141601182 36 - TSS region transcription start site region 63930
Tssr59460 6 141629499 to 141629527 28 + TSS region transcription start site region 59460
Del(6Slco1b2-Slco1a5)1Nki 6 141629518 to 142322981 693463 chromosomal deletion deletion, Chr 6, the Netherlands Cancer Institute 1
Slco1b2 6 141629518 to 141686646 57128 + protein coding gene solute carrier organic anion transporter family, member 1b2
Tssr59461 6 141632417 to 141632432 15 + TSS region transcription start site region 59461
Tssr59462 6 141632600 to 141632611 11 + TSS region transcription start site region 59462
D6Mit112 6 141632908 to 141633025 117 DNA segment DNA segment, Chr 6, Massachusetts Institute of Technology 112
Tssr59463 6 141644910 to 141644917 7 + TSS region transcription start site region 59463
Tssr59464 6 141671879 to 141671889 10 + TSS region transcription start site region 59464
Tssr59465 6 141683228 to 141683239 11 + TSS region transcription start site region 59465
Tssr59466 6 141685758 to 141685769 11 + TSS region transcription start site region 59466
Gm5724 6 141708118 to 141773810 65692 - protein coding gene predicted gene 5724
Gm23069 6 141714781 to 141715091 310 - unclassified non-coding RNA gene predicted gene, 23069
Tssr63931 6 141778087 to 141778098 11 - TSS region transcription start site region 63931
Tssr63932 6 141778101 to 141778124 23 - TSS region transcription start site region 63932
Slco1a4 6 141805440 to 141856199 50759 - protein coding gene solute carrier organic anion transporter family, member 1a4
Tssr63933 6 141855524 to 141855570 46 - TSS region transcription start site region 63933
Tssr2050 6 141856184 to 141856191 7 - TSS region transcription start site region 2050
Tssr63934 6 141856192 to 141856234 42 - TSS region transcription start site region 63934
Tssr59467 6 141866343 to 141866356 13 + TSS region transcription start site region 59467
Tssr59468 6 141866358 to 141866365 7 + TSS region transcription start site region 59468
Gm30784 6 141866358 to 141875220 8862 + lincRNA gene predicted gene, 30784
Tssr59469 6 141866382 to 141866389 7 + TSS region transcription start site region 59469
Tssr59470 6 141876048 to 141876050 2 + TSS region transcription start site region 59470
Gm30843 6 141876070 to 141909012 32942 + lncRNA gene predicted gene, 30843
Tssr59471 6 141881106 to 141881129 23 + TSS region transcription start site region 59471
Slco1a1 6 141907282 to 141946962 39680 - protein coding gene solute carrier organic anion transporter family, member 1a1
Gm22036 6 141915078 to 141915292 214 - unclassified non-coding RNA gene predicted gene, 22036
D6Mit136 6 141921077 to 141921210 133 DNA segment DNA segment, Chr 6, Massachusetts Institute of Technology 136
Tssr63935 6 141946791 to 141946821 30 - TSS region transcription start site region 63935
Tssr63936 6 141946827 to 141946836 9 - TSS region transcription start site region 63936
Tssr63937 6 141946960 to 141946964 4 - TSS region transcription start site region 63937
Gm6614 6 141971845 to 142011414 39569 - protein coding gene predicted gene 6614
Gm23775 6 141983247 to 141983495 248 - unclassified non-coding RNA gene predicted gene, 23775
Slco1a6 6 142085761 to 142186177 100416 - protein coding gene solute carrier organic anion transporter family, member 1a6
D6Mit293.1 6 142095977 to 142096094 117 DNA segment DNA segment, Chr 6, Massachusetts Institute of Technology 293.1
D6Mit293 6 142096080 to 142096188 108 DNA segment DNA segment, Chr 6, Massachusetts Institute of Technology 293
Gm18159 6 142110456 to 142111525 1069 + pseudogene predicted gene, 18159
Tssr63938 6 142161083 to 142161099 16 - TSS region transcription start site region 63938
Tssr59472 6 142161491 to 142161494 3 + TSS region transcription start site region 59472
Gm20400 6 142161493 to 142173796 12303 + antisense lncRNA gene predicted gene 20400
Tssr63939 6 142186144 to 142186153 9 - TSS region transcription start site region 63939
Slco1a5 6 142234227 to 142322981 88754 - protein coding gene solute carrier organic anion transporter family, member 1a5
Gm25430 6 142238539 to 142238827 288 - unclassified non-coding RNA gene predicted gene, 25430
Tssr63940 6 142278846 to 142278855 9 - TSS region transcription start site region 63940
Tssr59473 6 142298419 to 142298435 16 + TSS region transcription start site region 59473
Iapp 6 142298425 to 142303820 5395 + protein coding gene islet amyloid polypeptide
Tssr59474 6 142303577 to 142303586 9 + TSS region transcription start site region 59474
Tssr59475 6 142314076 to 142314096 20 + TSS region transcription start site region 59475
Tssr63941 6 142322941 to 142322957 16 - TSS region transcription start site region 63941
Tssr63942 6 142322967 to 142322977 10 - TSS region transcription start site region 63942
Tssr63943 6 142322978 to 142323007 29 - TSS region transcription start site region 63943
Tssr63944 6 142323010 to 142323022 12 - TSS region transcription start site region 63944
Tssr63945 6 142323026 to 142323040 14 - TSS region transcription start site region 63945
Tssr63946 6 142323042 to 142323062 20 - TSS region transcription start site region 63946
D6Mit58 6 142323797 to 142323911 114 DNA segment DNA segment, Chr 6, Massachusetts Institute of Technology 58
Wta2 6 142323797 to 142323911 114 QTL weight adult 2
Tssr63947 6 142338990 to 142338996 6 - TSS region transcription start site region 63947
Cpgi18132 6 142345538 to 142346052 514 CpG island CpG island 18132
Tssr59476 6 142345648 to 142345693 45 + TSS region transcription start site region 59476
Pyroxd1 6 142345654 to 142363257 17603 + protein coding gene pyridine nucleotide-disulphide oxidoreductase domain 1
Tssr59477 6 142345701 to 142345712 11 + TSS region transcription start site region 59477
Recql 6 142350342 to 142387087 36745 - protein coding gene RecQ protein-like