Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 6:140426748-141081797

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53 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Plekha5 6 140424054 to 140597110 173056 + protein coding gene pleckstrin homology domain containing, family A member 5
Tssr59415 6 140432962 to 140432984 22 + TSS region transcription start site region 59415
Tssr59416 6 140479776 to 140479788 12 + TSS region transcription start site region 59416
Tssr59417 6 140479805 to 140479824 19 + TSS region transcription start site region 59417
Tssr59418 6 140479825 to 140479836 11 + TSS region transcription start site region 59418
Tssr59419 6 140491024 to 140491046 22 + TSS region transcription start site region 59419
Tssr59420 6 140491064 to 140491073 9 + TSS region transcription start site region 59420
Cpgi18127 6 140491092 to 140491249 157 CpG island CpG island 18127
Tssr59421 6 140491116 to 140491127 11 + TSS region transcription start site region 59421
Tssr63922 6 140513698 to 140513702 4 - TSS region transcription start site region 63922
Tssr59422 6 140514916 to 140514950 34 + TSS region transcription start site region 59422
Tssr59423 6 140516434 to 140516443 9 + TSS region transcription start site region 59423
Tssr59424 6 140527013 to 140527018 5 + TSS region transcription start site region 59424
Tssr59425 6 140530960 to 140530964 4 + TSS region transcription start site region 59425
Gm25780 6 140530963 to 140531215 252 + unclassified non-coding RNA gene predicted gene, 25780
Tssr59426 6 140591607 to 140591617 10 + TSS region transcription start site region 59426
Tssr59427 6 140591627 to 140591641 14 + TSS region transcription start site region 59427
Tssr59428 6 140591644 to 140591662 18 + TSS region transcription start site region 59428
Tssr2049 6 140601688 to 140601693 5 + TSS region transcription start site region 2049
Tssr59429 6 140607498 to 140607521 23 + TSS region transcription start site region 59429
Tssr63923 6 140613927 to 140613933 6 - TSS region transcription start site region 63923
Gm44013 6 140620162 to 140622423 2261 - unclassified gene predicted gene, 44013
Tssr63924 6 140620587 to 140620607 20 - TSS region transcription start site region 63924
Tssr59430 6 140621046 to 140621055 9 + TSS region transcription start site region 59430
Tssr59431 6 140621088 to 140621108 20 + TSS region transcription start site region 59431
Tssr59432 6 140621115 to 140621146 31 + TSS region transcription start site region 59432
Tssr59433 6 140622607 to 140622627 20 + TSS region transcription start site region 59433
Tssr59434 6 140622640 to 140622659 19 + TSS region transcription start site region 59434
Aebp2 6 140622663 to 140678472 55809 + protein coding gene AE binding protein 2
Tssr59435 6 140622695 to 140622708 13 + TSS region transcription start site region 59435
Cpgi18128 6 140622911 to 140625077 2166 CpG island CpG island 18128
Tssr59436 6 140623476 to 140623615 139 + TSS region transcription start site region 59436
Tssr59437 6 140623646 to 140623715 69 + TSS region transcription start site region 59437
Tssr59438 6 140623831 to 140623861 30 + TSS region transcription start site region 59438
Tssr59439 6 140623898 to 140623911 13 + TSS region transcription start site region 59439
Tssr63925 6 140624659 to 140624666 7 - TSS region transcription start site region 63925
Tssr63926 6 140625412 to 140625416 4 - TSS region transcription start site region 63926
Tssr59440 6 140639983 to 140639987 4 + TSS region transcription start site region 59440
Tssr59441 6 140642208 to 140642223 15 + TSS region transcription start site region 59441
Tssr59442 6 140651083 to 140651117 34 + TSS region transcription start site region 59442
Gm38918 6 140669133 to 140672791 3658 - lncRNA gene predicted gene, 38918
Gm30215 6 140681748 to 140826797 145049 + lncRNA gene predicted gene, 30215
Cpgi18129 6 140702345 to 140702496 151 CpG island CpG island 18129
Tssr63927 6 140720190 to 140720200 10 - TSS region transcription start site region 63927
Gm11077 6 140729284 to 140756053 26769 + protein coding gene predicted gene 11077
Cpgi18130 6 140733621 to 140733827 206 CpG island CpG island 18130
Rpl38-ps2 6 140746960 to 140747172 212 - pseudogene ribosomal protein L38, pseudogene 2
Tssr63928 6 140747211 to 140747226 15 - TSS region transcription start site region 63928
Tssr59443 6 140758949 to 140758956 7 + TSS region transcription start site region 59443
Tssr59444 6 140776866 to 140776870 4 + TSS region transcription start site region 59444
Gm43925 6 140784499 to 140784704 205 - pseudogene predicted gene, 43925
Gm30524 6 140955609 to 141044134 88525 + lincRNA gene predicted gene, 30524
Gm43927 6 141008169 to 141008285 116 - pseudogene predicted gene, 43927