Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 6:139129072-140454284

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58 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm44267 6 139137127 to 139137511 384 + unclassified gene predicted gene, 44267
Gm44268 6 139140770 to 139140933 163 + unclassified gene predicted gene, 44268
Gm25434 6 139196065 to 139196231 166 - snoRNA gene predicted gene, 25434
4922502N22Rik 6 139315597 to 139322576 6979 - lincRNA gene RIKEN cDNA 4922502N22 gene
Tssr2048 6 139321956 to 139321959 3 + TSS region transcription start site region 2048
Rergl 6 139493182 to 139501909 8727 - protein coding gene RERG/RAS-like
Tssr63913 6 139501883 to 139501902 19 - TSS region transcription start site region 63913
Tssr63914 6 139501907 to 139501918 11 - TSS region transcription start site region 63914
Tssr63915 6 139501921 to 139501933 12 - TSS region transcription start site region 63915
4930404I20Rik 6 139555559 to 139557611 2052 - lincRNA gene RIKEN cDNA 4930404I20 gene
4930443G03Rik 6 139575924 to 139577205 1281 - unclassified gene RIKEN cDNA 4930443G03 gene
Tssr59403 6 139587198 to 139587230 32 + TSS region transcription start site region 59403
Tssr59404 6 139599477 to 139599501 24 + TSS region transcription start site region 59404
Pik3c2g 6 139614072 to 139969284 355212 + protein coding gene phosphatidylinositol-4-phosphate 3-kinase catalytic subunit type 2 gamma
Tssr59405 6 139662684 to 139662696 12 + TSS region transcription start site region 59405
Gm37269 6 139776430 to 139778320 1890 + unclassified gene predicted gene, 37269
Gm43940 6 139830387 to 139830551 164 + unclassified gene predicted gene, 43940
Tssr59406 6 139841652 to 139841658 6 + TSS region transcription start site region 59406
Tssr59407 6 139896711 to 139896714 3 + TSS region transcription start site region 59407
Gm29930 6 139965545 to 139971786 6241 - lncRNA gene predicted gene, 29930
Plcz1 6 139989673 to 140041457 51784 - protein coding gene phospholipase C, zeta 1
Gm44112 6 140033161 to 140033532 371 - pseudogene predicted gene, 44112
Tssr63916 6 140041409 to 140041466 57 - TSS region transcription start site region 63916
Tssr63917 6 140041473 to 140041476 3 - TSS region transcription start site region 63917
Tssr59408 6 140041519 to 140041530 11 + TSS region transcription start site region 59408
Capza3 6 140041525 to 140042789 1264 + protein coding gene capping protein (actin filament) muscle Z-line, alpha 3
Tssr59409 6 140041534 to 140041537 3 + TSS region transcription start site region 59409
Tssr59410 6 140041549 to 140041562 13 + TSS region transcription start site region 59410
Gm45959 6 140046012 to 140069807 23795 - lncRNA gene predicted gene, 45959
D6Dcr26 6 140054282 to 140054379 97 DNA segment DNA Segment, Chr 6, Derry C. Roopenian 26
Gm44156 6 140056401 to 140057589 1188 - pseudogene predicted gene, 44156
Gm44155 6 140057583 to 140057994 411 + pseudogene predicted gene, 44155
Gm44158 6 140069994 to 140070498 504 - pseudogene predicted gene, 44158
Gm30056 6 140092113 to 140101197 9084 - lncRNA gene predicted gene, 30056
Tssr63918 6 140101134 to 140101149 15 - TSS region transcription start site region 63918
Tssr63919 6 140101153 to 140101160 7 - TSS region transcription start site region 63919
Tssr63920 6 140101163 to 140101172 9 - TSS region transcription start site region 63920
Gm44159 6 140132067 to 140132508 441 + pseudogene predicted gene, 44159
Cpgi18123 6 140143880 to 140144109 229 CpG island CpG island 18123
Gm24174 6 140166535 to 140166645 110 - rRNA gene predicted gene, 24174
D6Mit292.2 6 140189684 to 140189794 110 DNA segment DNA segment, Chr 6, Massachusetts Institute of Technology 292.2
D6Mit292 6 140189764 to 140189885 121 DNA segment DNA segment, Chr 6, Massachusetts Institute of Technology 292
D6Mit292.1 6 140189880 to 140189988 108 DNA segment DNA segment, Chr 6, Massachusetts Institute of Technology 292.1
Gm38917 6 140272410 to 140285735 13325 - lncRNA gene predicted gene, 38917
Gm3961 6 140295463 to 140296456 993 - unclassified gene predicted gene 3961
Cpgi18124 6 140296009 to 140296384 375 CpG island CpG island 18124
1700102F20Rik 6 140309071 to 140309740 669 + unclassified gene RIKEN cDNA 1700102F20 gene
n-R5s168 6 140319630 to 140319733 103 + rRNA gene nuclear encoded rRNA 5S 168
Cpgi18125 6 140385792 to 140385980 188 CpG island CpG island 18125
Tssr63921 6 140398118 to 140398139 21 - TSS region transcription start site region 63921
Gm5051 6 140420171 to 140420655 484 + pseudogene predicted gene 5051
Cpgi18126 6 140423602 to 140425095 1493 CpG island CpG island 18126
Tssr59411 6 140423911 to 140423960 49 + TSS region transcription start site region 59411
Tssr59412 6 140424046 to 140424082 36 + TSS region transcription start site region 59412
Plekha5 6 140424054 to 140597110 173056 + protein coding gene pleckstrin homology domain containing, family A member 5
Tssr59413 6 140424086 to 140424138 52 + TSS region transcription start site region 59413
Tssr59414 6 140424154 to 140424166 12 + TSS region transcription start site region 59414
Tssr59415 6 140432962 to 140432984 22 + TSS region transcription start site region 59415